... Algorithm & . Format requirements . ... SDPsite is a tool for identification of protein active and other functional sites, based on spatial clustering of SDPs (specificity-determining positions, described here ) with CPs (conserved positions). ... Mapping predictied positions onto structure and construction of the best cluster . ... The input data of the algorithm are a multiple protein alignment divided into specificity groups . ... is called statistical significance of the set of k* positions . ...

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• SDPsite - PF07978
• SDPsite - PF01798
• SDPsite - PF01399

S .. ... a database of structures of DNA-protein and RNA-protein complexes. ... a program for finding hydrophobic clusters in 3D structures of macromolecules . ... search of conserved hydrophobic clusters in aligned 3D structures of protein families . ... a program for analysis of multiple alignments . ... a program for automatic detection of aligned blocks in a multiple protein alignment. ... a program for detection of aligned blocks in a multiple alignment of sequences of PDB chains. ...

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• DNA/RNA-Protein structures

... Fri, 18 Feb 2011 18:48:37 +0300 . ... allpy/structure.py geometrical_core/geometrical-core . ... allpy/structure.py . ... 1.9 + 1.10 + Monomers from this sequence get attribute pdb_ residue 1.11 1.12 ?TODO: global pdb_structures 1.13 1.14 @@ -66,7 +66,6 @@ 1.15 structure = get_structure(pdb_file, self.name) 1.16 chain = structure[pdb_model][pdb_ chain ] 1.17 self.pdb_ chain = chain 1.18 - self.pdb_residues = {} 1.19 pdb_ sequence = self.__class__.from_pdb_ chain ( ...

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• allpy: b92cad794578 test/usecase1.py
• allpy: b92cad794578 sandbox/ttk.py
• allpy: 578bc81d5e62 allpy/pdb.py

Электронная библиотека Попечительского совета . ... Mehlhorn K. - Efficient data structures and algorithm . ... Название: Efficient data structures and algorithm . Автор: Mehlhorn K. Аннотация: . ... The authors use pictures, words and high-level pseudocode to explain the algorithms, and then they present more detail on efficient implementations using real programming languages like C++ and Java. ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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• Поиск книг, содержащих Associative structure :: Электронная библиотека
• Zung N.T. - Poisson Structures and their Normal Forms :: Электронная библиотека
• Cohen L.W., Ehrlich G. - The Structure of the Real Number System :: Электронная

OmniBasic . OmniBasic is a structured dialect of BASIC which is inherently easier to learn and use than C. OmniBasic incorporates Pascal style control structures. In addition to the features of an extended BASIC, OmniBasic has the advanced features normally associated with systems languages such as C and some features unique to OmniBasic. ... License Type: Commercial (Free demo available) . ... None . ... User Comments: . ... SAL Home | Programming | Languages Compilers . Comments? ...

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• SAL- Other Scientific Fields - Chemistry, Biology Related - Protein Structure
• SAL- Other Scientific Fields - Chemistry, Biology Related - MODELLER
• SAL- Computer Graphics, Images Signals - Misc - TINA

This home page belongs to small group of scientists working at . Sternberg Astronomical Institute which is a part of Moscow State University . ... Электронная библиотека научно-технической и художественной литературы (доступна только из ГАИШ) . ... Local staff . Dr. Edward Kononovich (konon -at- sai.msu.ru), Associate Professor . ... Dr. Sergey Ayukov (asv -at- sai.msu.ru), Research Fellow, Webmaster of the group . ... Joint seminar of Solar Studies Structure Group and Solar Photometry Group . ...

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• Fortran and Pascal
• Dos32Profile API

... If there's no significant multiple alignment , including the sequence, that you interest, then the secondary structure is built, using only the energy model (just the potential energy of the system is minimized), but very often such method will give unreliable results. ... It should be mentioned that by default, at alignment case, the RNA secondary structure will be predicted for the first sequence of the alignment. ... It is done through optimizing, not the real, but model energy of the structure. ...

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• Screening protein sequence against PROSITE databank
• BLAST Basic Overview
• GeneBee BLAST 2.2.8 Services Help

Anchoring patterns and point mutations in pairwise alignments using AlignMe X-ray crystal structures have revealed that numerous membrane proteins, such as GPCRs or some secondary transporters, despite the lack of any detectable sequence similarity between them, still share very similar 3D structures. ... The novel feature allows the user to define any number of anchors with varying strength for improving the quality of pairwise alignments in challenging cases lacking notable sequence similarity. ...

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• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/81.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/101.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/157.pdf

... Rector of Bauman Moscow State Technical University, the President of the Association of Technical Universities . ... Rector of Southern Federal University, the Chairman of the Council of Rectors of the South of Russia . ... The President of Bauman Moscow State Technical University, the Chairman of the Council of Rectors of the Central Federal District . ... Rector of Moscow Institute of Physics and Technology (State University), the Chairman of the Council of Rectors of Moscow and Moscow Oblast . ...

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• KARAMURZOV BARASBI SULEIMANOVICH
• PARAKHIN NIKOLAY VASILIEVICH
• GLYBOCHKO PETR VITALYEVICH

... Derived datatypes . Up: Point-to-Point Communication Next: Datatype constructors Previous: Null processes . ... Instead, MPI provides mechanisms to specify more general, mixed, and noncontiguous communication buffers. ... More general communication buffers are specified by replacing the basic datatypes that have been used so far with derived datatypes that are constructed from basic datatypes using the constructors described in this section. ... A sequence of basic datatypes . ... Центры . ...

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• Partitioning of Cartesian structures | PARALLEL.RU -

... Method of recursive sequences in associated liquids theory . ... In case of chain association the comparison of RS-method with earlier developed matrix technique is performed. ... Moscow University Chemistry Bulletin . 2011, Vol. ... 3, P. 175 . Copyright (C) Chemistry Dept., Moscow State University, 2002 . ... Copyright (C) Chemisty Department of Moscow State University . ... Web-design: Copyright (C) MIG and VVM . ...

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• On the Structure and Dielectric Properties of
• Modeling of Supramolecular Ordering in Molecular Liquids: Structure,
• Structure and Interaction Energies of the Ar...Cl2 Complex. Application of the

ExPASy Home page . Site Map . ... PS00008 MYRISTYL N-myristoylation site : Hits on PDB 3D structures: [ 1MOQ , 1MOR ] . ... PS00007 TYR_PHOSPHO_SITE Tyrosine kinase phosphorylation site : Hits on PDB 3D structures: [ 1MOQ , 1MOR ] . ... PS00006 CK2_PHOSPHO_SITE Casein kinase II phosphorylation site : Hits on PDB 3D structures: [ 1MOQ , 1MOR ] . ... PS00005 PKC_PHOSPHO_SITE Protein kinase C phosphorylation site : Hits on PDB 3D structures: [ 1MOQ , 1MOR ] . ... do not show sites in hits: . ...

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• WikiProcessors тАУ Tanchiki
• Summary Table Sequence
• Conservative Amino Acid Residues

... Physics Department . ... Home :: Directions of Research :: Polymers with Associating Groups (experiment + theory + computer experiment) Structure and properties of aggregates, multiplets and clusters. ... Polymers with Strongly Interacting Groups: Theory for Non-Spherical Multiplets. ... Computer Simulation of Solutions of Telechelic Polymers with Associating End-Groups. ... Home :: Directions of Research :: Polymers with Associating Groups (experiment + theory + computer experiment) . ...

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• Laboratory of Broadband Dielectric Spectroscopy - Chair of Polymer and Crystal
• PSMTLab - Сотрудничество и Совместные проекты
• Sequence Design of Copolymers with Special Functional Properties - Chair of

... Alternative core new atoms (%) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Geometrical core of a set of structures is a subset of alignment positions those atoms are disposed similarly in all structures. ... For any two positions included into geometrical core, the distances between CA atoms of those positions in all structures may differ not more than the value of the parameter "Distance spreading". ...

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• wLake program homepage
• S : rm_systems

Выберите категорию обращения: Общие вопросы Отчеты Рейтинги Диссертационные советы Конкурсы Ввод данных Структура организаций Пользователи Проблемы с регистрацией\входом в систему . ... Войти в систему . ... Ulianov SV , Khrameeva EE , Gavrilov AA, Flyamer IM, Kos P. , Mikhaleva EA, Penin AA , Logacheva MD , Imakaev MV, Chertovich A. , Gelfand MS , Shevelyov YY, Razin SV . в журнале Genome Research , издательство Cold Spring Harbor Laboratory Press (United States) , том 26, с. 70-84 DOI . ...

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• Liferovich R.P. - сотрудник | ИСТИНА - Интеллектуальная Система Тематического
• Journal of the Marine Biological Association of the United Kingdom - журнал |
• Rubtsov PM - сотрудник | ИСТИНА - Интеллектуальная Система Тематического

... Next: DSP board program Up: SPM Installation Previous: Mechanical system of the Contents Index . Figure 1.3: Software structure. The server part of the software is working under Windows NT or XP operating systems. ... Second level - operating system driver, that allow to exchange data with DSP board through input/output ports. ... This structure is a result of qualities this system should satisfy: precise process synchronization, hi-speed data transfer, network support, convenience in usage. ...

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... Faculty of Physics . M.V.Lomonosov Moscow State University . 7 (495) 939-16-82 info@physics.msu.ru . ... Contacts . ... Education . ... ALUMNI ASSOCIATION OF THE FACULTY OF PHYSICS . All the graduates from the Faculty of Physics, M.V.Lomonosov Moscow State University, are united in the Aluimni Association of the Faculty. ... For more detailed information, please follow the inks given below: Alumni Association of the Faculty of Physics, M.V.Lomonosov Moscow State University . ...

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Network Working Group S. Kent Request for Comments: 4304 BBN Technologies Category: Standards Track December 2005 Extended Sequence Number (ESN) Addendum to IPsec Domain of Interpretation (DOI) for Internet Security Association and Key Management Protocol (ISAKMP) Status of This Memo This document specifies an Internet standards track protocol for the Internet community, and requests discussion and suggestions for improvements. ... Copyright Notice Copyright (C) The Internet Society (2005). ...

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• http://mirror.msu.net/pub/rfc-editor/rfc-ed-all/pdfrfc/rfc4304.txt.pdf
• http://mirror.msu.net/pub/rfc-editor/rfc-ed-all/mibs/private.mibs/3com.txt
• http://mirror.msu.net/pub/rfc-editor/rfc-ed-all/rfc5914.txt

Next: msgtool: An interactive message Up: 6.4.2 Message Queues Previous: SYSTEM CALL: msgsnd() . ... Now, we will turn the discussion to directly manipulating the internal structures associated with a given message queue. To perform control operations on a message queue, you use the msgctl() system call. ... Sets the value of the ipc_perm member of the msqid_ds structure for a queue. ... We retrieve a current copy of the internal data structure by a quick call to our get_queue_ds wrapper function. ...

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• Basic Concepts
• Apache 2.0 Hook Functions - Apache HTTP Server
• Kernel ipc_perm structure

... Instructions are in README.TXT file inside the tarball. ... tar -xvf nhunt_x86.tar Query and database files should contain sequences in FASTA format ( wikipedia description ). ... Default name of the output file is 'nhunt.out'. ... Any parameter consists of key and value and is called as '-key value', where 'key' is one character and 'value' is any number of characters. -i Query file . ... No default value. -d Database file . ... No default value. -o Output file . ... Default value: 'nhunt.out' . ...

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• ConClus