Copyright 1999-2015 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Id$ EAPI=5 PYTHON_COMPAT=( python2_7 ) inherit eutils toolchain-funcs python-r1 DESCRIPTION= Genome-scale comparison of biological sequences HOMEPAGE= http :// last.cbrc.jp / SRC _URI= http :// last.cbrc.jp /${P}.zip LICENSE = GPL-3 SLOT= 0 IUSE= KEYWORDS= ~ ...

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... Interface description . ... 6 Distributed array creating and deleting . ... 13.4 Access to elements of local part of distributed array . 13.4.1 Requesting if array element is allocated in local part of distributed array . ... 13.4.5 Coping element of local part of distributed array to element of local part of other distributed array . 13.4.6 Requesting address of element of local part of distributed array . ... 14.5 Access to distributed array elements, allocated in remote element buffer . ...

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... A regular expression (regex) is a powerful way of specifying a complex search. MySQL uses regular Henry Spencer's inplementation of regular expressions. ... MySQL uses the extended version. This is a simplistic reference that skips the details. To get more exact information, see Henry Spencer's regex(7) manual page that is included in the source distribution. ... A regular expression describes a set of strings. The simplest regexp is one that has no special characters in it. ...

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• mod_dav - Apache HTTP Server

... Screening by Keyword then by Similarity . ... Protein banks . SWISSPROT protein databank TREMBL protein databank . ... Query Keyword string You can use here any keywords and 'or' , 'and' and 'andnot' logical operators. Query sequence (without name) . Examples of the Query Keywords: . proteinase cleave . DE [proteinase] AND cleave (could be written as: DE [proteinase] cleave) . DE [proline] DE [endopeptidase] ) OR ( KW [proteinase] DE [cleave] ) . XX[A$b5] ANDNOT cleave . ...

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hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file : /mnt/databanks/pfam/Pfam_fs Sequence file : ./ehmmpfam-1242846492.27070 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query ...

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Электронная библиотека Попечительского совета . ... Percus J.K. - Mathematics of genome analysis . ... Название: Mathematics of genome analysis . Автор: Percus J.K. Аннотация: . ... This short textbook presents a brief description of several ways in which mathematics and statistics are being used in genome analysis and sequencing. ... Subsequence analysis, categories 108 . Subsequence analysis, clusters 109 . ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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Calcareous paleosols are widely distributed throughout the arid and semi arid regions of the world. These paleosols have been described from virtually every continent of the world, yet there is no internationally agreed upon nomenclature for the description of the horizons present within them. ... This abstract proposes the adoption of a universally agreed-upon system of horizon designation and gross morphological description of calcareous paleosols. ... Soil Science, 101, 347-360. ...

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... CPU time, seconds. Test 1, PC GAMESS . ... input , output ) . ... Test 1, WinGAMESS . ... Not enough memory to run test . ... The PC GAMESS performance does not depend on particular Operating System in use. ... Tests 1 and 3 demonstrate unknown bug (most likely, in ECP or 2-e integrals part) of WinGamess (and possible GAMESS (US) as well). ... Test 6 demonstrates bug in WinGamess/GAMESS (US) DIIS CPHF solver code resulting in completely wrong energy gradient . ...

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The files containing information about Affymetrix microarrays were downloaded from the official Affymetrix site. ... Probe sequences were mapped to the genome using Blat. ... The hits found "probe alignment regions" were . ... We annotated each probe alignment region using the mRNA and EST alignments provided by UCSC, considering only . ... The textual part of the interface consists of probe information section, probe alignment section and transcription state . ... Each gene and each probe alignment . ...

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... Apache HTTP Server Version 2.0 . Apache > HTTP Server > Documentation > Version 2.0 > Modules . ... To enable mod_dav , add the following to a container in your httpd.conf file: . ... In addition, a location for the DAV lock database must be specified in the global section of your httpd.conf file using the DavLockDB directive: . ... In order for mod_dav to manage files, it must be able to write to the directories and files under its control using the User and Group under which Apache is running. ...

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• HelpOnProcessingInstructions - UNИX
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... files . ... allpy/base.py . ... 1.52 + Sequence = cls. sequence _type 1.53 + not_gap = lambda (i, char): char != - 1.54 + no_gaps = line.replace( - , ) 1.55 + sequence = Sequence (no_gaps, name , description , source) 1.56 + for i, (j, char) in enumerate(filter(not_gap, enumerate(line))): 1.57 + self[j][seq] = sequence [i] 1.58 + self. sequences .append( sequence ) 1.59 + 1.60 + @classmethod 1.61 + def from_fasta(cls, ... 2.6 2.7 - Return a dict of { sequence header: sequence body }. ...