... day commit -- a lot of changes fasta.py: universal save_fasta() determine_long_line -- for determine length of fasta sequence string in user input everywhere: standart long_line=60 -- 70 blocK. sequences _chains: returns sequences in order as in project added monomer pdb_secstr to store secondary structure pdb adding: some improvements and fixes fix in from_pdb_ chain : use all peptides, not only first ... 22 * self.positions -- sorted list of positions of the project.alignment that . ...

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• allpy: 2ed0c183867a lib/block.py
• allpy: 0c7f6117481b lib/block.py
• allpy: 2deb7942fbed lib/block.py

Block|from|to(exclusive)|gaps 0|0|7|0 1|20|49|0 2|58|100|2 3|16|100|2 4|49|58|0 5|8|16|0 6|16|20|0 # Block|Sequence 0| file :/ data / npidb / pdb / pdb_new / biounits /4a1e.pdb1. pdb :M:0: 197 : 294 0| file :/ data / npidb / pdb / pdb_new / biounits /3o58.pdb1. pdb :E:0: 192 : 289 0| file :/ data / npidb / pdb / pdb_new / biounits /4a17.pdb1. pdb :M:0: 197 : 294 0| ...

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• http://monkey.belozersky.msu.su/npidb/pdb/pdb_new/Block_3D/PF00440.18.fasta.hb
• http://monkey.belozersky.msu.su/npidb/pdb/pdb_new/Block_3D/PF00157.12.fasta.hb
• http://monkey.belozersky.msu.su/npidb/pdb/pdb_new/Block_3D/PF00398.15.fasta.hb

... Block DNA GyrB" shows the score of pairs Lys|Lys, Lys|Arg and Lys|Ser respectively, from a block constituted by amino acid sequences from the same protein (DNAGyraseB), but from different organisms, for example GYRB_ECOLI, GYRB_YERPE (yeast), GYRB_HEINE, GYRB_MUSC (mouse). Block 200 illustrates the score of these pairs from 200 different blocks constituted by sequences from differnet organisms. ... Between the values of single BLock the differences are smaller than between the values of Blosum62. ...

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• http://kodomo.cmm.msu.ru/~ellys/links.html
• Task 4 (Functions, 2005)
• Занятие 9. Транспортные белки.

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• Index of /npidb/pdb
• Index of /npidb/data/pdb_new
• Blocks finder

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• Index of /npidb/pdb
• Index of /npidb/pdb/pdb_new/scop_contact_type
• Index of /npidb/pdb/pdb_new/hybrid

... Protein sequences: . ... OWL : non-redundant database assembled from a number of primary sources including translations of nucleic acid sequences (Swissprot, PIR, NRL3-D and GenPept). ... Database of protein families and HMMs (collection of multiple sequence alignments and hidden Markov models) . ... Collection of protein families constructed by clustering all complete protein sequences in SwissProt. ... The Genome Sequence Database: complete relational database of DNA sequences and annotation . ...

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• AliGraf - GeneBee Graphical Alignment Help
• AliComp - GeneBee Alignment Comparison Help
• TreeTop - Phylogenetic Tree prediction

... About lab . ... MSU Graphics & Media Lab (Video Group) . The filter is intended for recovering visual quality of video ripped from DVD (for example, when it contains 4 hours of video data), VideoCD or after decompressing by H.261, H.263, H.264, DivX, XviD, etc. The algorithm decreases blocking artifacts, significantly improving visual quality of video. Filter automatically determines the blockiness's strength on the frame and in the certain part of it, preserving the maximum of details. ...

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• Removing of blocking effect from video | Лаборатория компьютерной графики и
• Smart removal of blocking effects from video | Лаборатория компьютерной графики
• Smart removal of blocking effects from video | Graphics and Media Lab

NPG-explorer : a new tool for nucleotide pangenome construction and closely related prokaryotic genomes analysis Boris Nagaev2, Maxim Nikolaev2, Andrei Alexeevski 1 1,2,3* A.N.Belozersky Institute Of Physico-Chemical Biology and 2Faculty ... @gmail.com Moscow State University, Moscow 119991, Russia 3Scientific Research Institute of System Analysis (NIISI RAS), Moscow Genomes of closely related bacteria have highly similar sequences of orthologous ... Blocks are classified into four categories. ...

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• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/164.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/18.pdf

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• NPIDB: Home
• NPIDB: 5DPK structure
• Index of /data/pdb_new/hybrid

Given word length and max number of mismatches . Use MEME algorithm for define conserved blocks . Apply the Dynamic programming algorithm to create chain of the blocks . Refine the chain using combined profile for chain of blocks. ... Reduce word length and number of mismatches and repeat the procedure for spacer between the blocks. ... Create helix profile and apply MEME-like iterative procedure to find sets of helices that consistent lokated reative to conserved blocks . ...

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• SDPsite - PF07978
• SDPsite - PF01171
• SDPsite - PF01205

. As your body grows bigger . Your mind grows flowered . It's great to learn . >Cause knowledge is power!< . It's Schoolhouse Rocky . That chip off the block . Of your favourite schoolhouse . Schoolhouse Rock! . Back to main Schoolhouse Rock menu...

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Электронная библиотека Попечительского совета . ... Block L.S., Coppel W.A. - Dynamics in One Dimension . ... Название: Dynamics in One Dimension . Авторы: Block L.S., Coppel W.A. Аннотация: . ... Degree, one lift 232 . ... Symbolic dynamics 34 . ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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• Beckenbach E.F. (ed.) - Applied Combinatorial Mathematics :: Электронная
• Brown S.M. - Bioinformatics: A Biologist's Guide to Biocomputing and the
• Koonin E.V., Galperin M.Y. - Sequence - Evolution - Function: Computational

... Астронет | ... планета Астронет | ... Сверхновые . Яркая сверхновая в M82 . ... 1999 2000 2001 2002 . ... NASA Web Site Statements, Warnings, and Disclaimers . NASA Official: Jay Norris. ... Публикации с ключевыми словами: starburst galaxy - star formation - supernova - взрывы сверхновых - сверхновые типа Ia . Публикации со словами: starburst galaxy - star formation - supernova - взрывы сверхновых - сверхновые типа Ia . ... NGC 6188 и NGC 6164 . ... NGC 1999: к югу от Ориона . ...

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• Bakasa Eclipse Sequence
• Clouds and the Moon Move to Block the Sun
• Sun Block

... 2011/12/09 . ... added alignment merging . added parameter corresponding to the width of output alignment . fixed homologue searching for very long query sequences . ... Copyright 2010-2011 Yury Pekov ...

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• Nhunt

... Content Model: Optional list header (LH), followed by one or more list items (LI) . An ordered list typically is a numbered list of items. ... The numbering style is left to associated style sheets, e.g. whether nested lists contribute to a compound item number, e.g. "3.1.5", or whether numbers are rendered as arabic, upper or lower case roman numerals or using the numbering scheme appropriate to the language context. ... CLASS . ... The CLEAR attribute allows you to move down unconditionally: . ...

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• Moving, Copying and Deleting blocks of text
• Block Quotes
• Copying a block of text

... Progress . ... RMA calls must have local semantics, except when required for synchronization with other RMA calls. ... On the origin process, an RMA communication may become enabled as soon as the corresponding put, get or accumulate call has executed, or as late as when the ensuing synchronization call is issued. ... This code will deadlock: the wait of process 1 blocks until process 0 calls complete, and the receive of process 0 blocks until process 1 calls send. ... Центры . ...

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• Blocking send | PARALLEL.RU - Информационно-аналитический центр по параллельным
• Blocking receive | PARALLEL.RU - Информационно-аналитический центр по
• Blocking Send and Receive Operations | PARALLEL.RU -

... 101 (FDH_PSESR, P33160) (PF00389; 2-Hacid_dh) (PF02826; 2-Hacid_dh_C): 2-Hacid_dh 47-144; 2-Hacid_dh_C 150-332 Lineage: Root: scop Class: Alpha and beta proteins (a/b) Mainly parallel beta sheets ( beta - alpha - beta units) Fold: NAD(P)-binding Rossmann-fold domains core: 3 layers, a/b/a; parallel beta -sheet of 6 strands, order 321456 The nucleotide-binding modes of this and the next two folds/superfamilies are similar Superfamily ...

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• http://dualopt1.cmm.msu.ru/pub/Education/WebHome/task_modeller_2009.doc
• %TOPICTITLE% (25 vs. 26) - TWiki
• HierarchicalNavigation - TWiki - TWiki - (printable)

... Another way to fend off and detect impostors is to use call sequence checks. Call sequence checks help you protect against intruders that somehow managed to find out the password you log into your UUCP system with. ... When the attacker call your UUCP feed and steals your mail, this will increase the feeds call sequence number by one. ... If you have enabled call sequence checks, you should check your log files regularly for error messages that hint at possible attacks. ...

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• Formatting

... The record format is a length byte, a command byte and the data bytes. ... command| data | Rapicom 450 Facsimile Record Commands: 56 - SET-UP The command code 56 (70 octal) indicates the following data field is a set up block. ... The line below represents a DATA record, where L represents a length bit, C represents a command bit, M represents the synchronization mark, S represents a sequence bit, F represents a fill bit, the dash represents 68 other data octets, and an D represents a data bit. ...

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• http://mirror.msu.net/pub/rfc-editor/rfc-ed-all/pdfrfc/rfc769.txt.pdf
• Index of /pub/gentoo-portage/sys-block/blocks/
• Index of /pub/gentoo-portage/sys-block/

Xmmx . Xmmx is a GPL-ed portable programmer's text editor, featuring folds editing (structurizing of programs), regular-expressions-search, tunable keyboard and codepage layout, macrocommands (both sequences of keystrokes and scripting language), blocks editing. ... http://demos.ipi.ac.ru/~machulsk/xmmx/ . ... Software/Hardware Requirements: . ... None . ... User Comments: . ... SAL Home | Office Software | Text Editors . Comments? ... Copyright 1995-2001 by Herng-Jeng Jou . ...

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• APOD: 2015 October 7 - La Palma Eclipse Sequence
• APOD: 2001 July 6 - Bakasa Eclipse Sequence
• APOD: 2013 December 28 - Alaska Aurora Sequence