Home . Database of structures of nucleic acid - protein complexes . ... List of complexes . Pfam families . SCOP families . Interaction classes . ... NPIDB . ... Information on SCOP and Pfam domains detected in protein chains is presented. ... Each family has its own web page with the list of entries that include domains of the family. ... List of SCOP domains occurred in DNA-protein and RNA-protein complexes is organized in tree-like form, according to the SCOP classification. ...

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• NPIDB: About Us

... Database of structures of nucleic acid - protein complexes . ... List of complexes . Pfam families . SCOP families . ... Information on SCOP and Pfam domains presented in protein chains of structures is presented. ... Each family has its own web page with the list of entries that include domains of the family. ... Scop families . List of SCOP domains occurred in DNA-protein and RNA-protein complexes is organized in tree-like form, according to the SCOP classification. ...

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• DNA/RNA-Protein structures
• Hydrophobic clusters
• NPIDB service

... Supercomputing Technologies in Science, Education and Industry Almanac Series . ... Octoshell: Lightweight and Innovative Cluster Management System . ... CLEO: User&Admin-Friendly Cluster Batch System . ... Cleo is used on SKIF MSU тАЬCHEBYSHEVтАЭ cluster (5000 cores) and тАЬGraphIT!тАЭ (192 CPU cores + 48 . GPUs) supercomputers of Moscow State University . ... Research Computing Center (RCC) of Lomonosov Moscow State University . Supercomputing Consortium of Russian Universities . ...

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• APPLICATIONS: Geophysics | Moscow University Supercomputing Center
• APPLICATIONS: Informatics | Moscow University Supercomputing Center
• APPLICATIONS: Mathematics | Moscow University Supercomputing Center

... The first-order intermolecular perturbation theory developed in the frame of diatomics-in-molecule approach is used to calculate the potential energy surfaces of the Ar.. Cl2 complex in the states which correlate with the X0g+ and B0u+ states of Cl2 fragment. ... Laboratory of Molecular Structure and Quantum Mechanics ...

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• Moscow University Chemistry Bulletin Vol. 50, No. 1, P. 9 (2009)
• Moscow University Chemistry Bulletin Vol. 54, No. 6, P. 303 (2013)
• Laboratory of molecular beams

... Kopper K. - The Linux Enterprise Cluster: Build a Highly Available Cluster with Commodity Hardware and Free Software . ... Название: The Linux Enterprise Cluster: Build a Highly Available Cluster with Commodity Hardware and Free Software . ... The Linux Enterprise Cluster explains how to take a numberof inexpensive computers with limited resources, place them on a normal computer network, and install free software so that the computers act together like one powerful server. ...

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• Duncan M.A. - Advances in Metal and Semiconductor Clusters (Vol. 4): Cluster
• Bookman C.A. - Linux Clustering: Building and Maintaining Linux Clusters ::
• Tsytovich V.N. (Ed), Morfill G.E. (Ed) - Elementary Physics of Complex Plasmas

PETROTYP has been designed for clustering igneous rock compositions given as concentrations of major element oxides. This program is based on principles of hierarchical grouping of objects that are characterized by an array of parameters described as an objective function (Ward, 1963). The major principle involves a subsequent combining of samples having the minimum geochemical distance (GD) with respect to other rocks or average cluster compositions formed at a previous stage. ...

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... Curriculum Vitae Observations and theory of star cluster formation 22) A.K.Dambis and Yu.N.Efremov Journal for History of Astronomy, 31, 115-134, 2000 Dating Ptolemy's star catalogue through proper motions: the Hypparchan epoch 23) B.G.Elmegreen, Yu.N.Efremov, S.Larsen Astrophys. J., 535, 748 - , 2000 A young globular cluster in the galaxy NGC 6946 24) Yu.N.Efremov. ... 28) Yu.N.Efremov. ... The location of star complexes in the Galaxy was studied in papers with E.Alfaro, L.Berdnikov and T.Sitnik. ...

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• Division of the Galaxy and Variable Stars

... Shvilkina L.B. , Belega E.D. , Elyutin P.V. , Trubnikov D.N. в журнале Zeitschrift Fur Physik D-Atoms Molecules and Clusters , том 42, ? ... Lhagva O. , Badamdamdin R. , Strakhova Si , Hehnmedeh L. в журнале Zeitschrift Fur Physik D-Atoms Molecules and Clusters , том 27, ? ... Balashov V.V. , Grum-Grzhimailo A.N. в журнале Zeitschrift Fur Physik D-Atoms Molecules and Clusters , том 23, ? ... в журнале Zeitschrift Fur Physik D-Atoms Molecules and Clusters , том 16, ? ...

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• Mamaev V.M. - сотрудник | ИСТИНА - Интеллектуальная Система Тематического
• Journal of Cluster Science - журнал | ИСТИНА - Интеллектуальная Система
• Szcz??niak Ma?gorzata M. - сотрудник | ИСТИНА - Интеллектуальная Система

... D. Thesis . ... The Alexander Moskovsky Ph.D. thesis defence has occured on March 29, below on this page, the detailed abstract and full text of thesis are available for download (in Russian only). ... С этой страницы можно загрузить автореферат и полный текст диссертации в формате Microsoft Word . ... Автореферат . Microsoft Word (1.23 Мб) . MS Word, ZIP (1.01 Мб) . Диссертация . ... Back to Alexander Moskovsky page. Back to the main page. ...

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• History
• Alexander A. Moskovsky homepage

with Materials Atoms Nuclear Instruments and Methods in Physics Research B xxx (2005) xxx­xxx www.elsevier.com/locate/nimb Cluster size dependence of sputtering yield by cluster ion beam irradiation T. Seki a a,b,* , T. Murase a, J. Matsuo a Quantum Science and Engineering Center, Kyoto University, Gokasyo, Uji ... These results suggested an empirical formula to calculate sputtering yield from the ion energy and the size distribution of the cluster. ... Fig. ...

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• http://danp.sinp.msu.ru/Articles_GSIB/nimb_GCIB_energydistribution.pdf
• http://danp.sinp.msu.ru/Articles_GSIB/nimb_Ar_clasterionbeam.pdf
• http://danp.sinp.msu.ru/Articles_GSIB/nimb_gasclasterionbeam_aplications.pdf

... Algorithm & . Format requirements . ... SDPsite is a tool for identification of protein active and other functional sites, based on spatial clustering of SDPs (specificity-determining positions, described here ) with CPs (conserved positions). ... Mapping predictied positions onto structure and construction of the best cluster . ... The input data of the algorithm are a multiple protein alignment divided into specificity groups . ... is called statistical significance of the set of k* positions . ...

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• SDPlight

... Minimal size of Clud clusters (residues) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Hydrophobic cluster of a single protein structure is a separated pool of nonpolar atoms. Usually there is the biggest cluster in the protein called hydrophobic core. ... ConClus program is able to detect of conservative hydrophobic clusters for a family of related protein domains or just for a set of aligned proteins. ...

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• Nhunt: program for nucleic acid sequence similarity search

Firefly (previously known as the PC GAMESS) is a freely available ab initio and DFT computational chemistry program developed to offer high performance on Intel-compatible x86, AMD64, and EM64T processors. ... At moment, Firefly includes no more than 5% of the legacy code. ... Firefly is freely available for all main PC operating systems: Windows, Linux, and Mac OS X. Firefly supports various Windows versions including Windows 8, Windows 7, Windows Server 2008, Vista, 2003, XP, 2000, NT, and 98/Me. ...

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• Lesson 1: getting the most power of your multicore, SMP system or cluster with
• Firefly downloads area terms of use
• PC GAMESS/Firefly DOCUMENTATION - MPI bindings for Windows

... wLake 1.7 . wLake is a tool which allows to identify clusters of a structural water molecules in given superimposed 3D structures. Put your coordinates in PDB format into the text area. Select a distance threshold. Two water molecules from different structures will be concidered as located in the same space point if the distance between centers of oxygen atoms is less than this threshold. ... EACH STRUCTURE INCLUDING ITS WATER MOLECULES MUST BE PRESENTED AS SEPARATE MODEL: EXAMPLE. ...

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• Cluster 2
• Cluster 135
• Cluster 133

... Apache HTTP Server Version 2.0 . Apache > HTTP Server > Documentation > Version 2.0 > Modules . ... To enable mod_dav , add the following to a container in your httpd.conf file: . ... In addition, a location for the DAV lock database must be specified in the global section of your httpd.conf file using the DavLockDB directive: . ... In order for mod_dav to manage files, it must be able to write to the directories and files under its control using the User and Group under which Apache is running. ...

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• Newsreader Configuration

BLASTCLUST - BLAST score-based single-linkage clustering. ... BLASTCLUST automatically and systematically clusters protein or DNA sequences based on pairwise matches found using the BLAST algorithm in case of proteins or Mega BLAST algorithm for DNA. ... The primary input format for BLASTCLUST is a FASTA-format sequence file. ... Another type of input is a sequence hit-list previously saved by BLASTCLUST (in this case BLASTCLUST will use pre-computed HSP data instead of making de novo comparisons). ...

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• Available Reports тАУ Tanchiki
• Available Reports тАУ Python Battle
• Available Reports тАУ Petri Dish

Google as a taxonomic engine Alexey Shipunov Background: tree cow mouse rat Background: Google Scholar · · · · · · · Extract phyla names Obtain numbers of joint hits Do some magic Calculate similarity Make clusters Same, with - ecology Same, with classes names Numbers of joint hits · · · · · Phyla names from my synat classification R script to ...

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... L Сd , Pol a nd ABOUT EFFECTIVE MODES METHOD FOR DESCRIPTION OF INTERNAL DYNAMICS OF WEAKLY BOUND CLUSTERS Elena Belega, Evgeny Cheremukhin 1 , Dmitry Trubnikov Abstract: New approach to describe the internal dynamics of weakly bound clusters is presented. ... It is found that the number of active collective modes depends on the initial cluster excitation and that the internal energy is partitioned nonuniformly among the modes. ... Collective motion of oxygen atoms performs mostly in plane. ...

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• Публикации
• Сотрудники - Ларин Александр Владимирович

Organization and evolution of piRNA clusters in mosquitoes Phillip George, Chantal Vaury, Silke Jensen, Igor V. Sharakhov Entomology Department, Virginia Polytechnic Institute ... Development (GReD), University of Clermont-Ferrand, ClermontFerrand, France, chantal.vaury@udamail.fr The Piwi-interacting RNA ( piRNA ) pathway is an important mechanism in the defense against transposable element (TE) mobilization in many species including ...

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• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/161.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/300.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/126.pdf

Proceedings of Turbulent Shear Flows XI , 1997. NASA Technical Paper # 3555 , 1997. Proceedings of European Turbulence Conference VI , 1996. ESPRI Research Report # 104, 117-143 (1996) . ... Proceedings of Turbulent Shear Flows X , 1995. ASME Paper 95-GT-437 , 1995. ... Invited AIAA Paper 94-2281 presented at the 1994 AIAA Fluid Dynamics Conference, Colorado Springs, CO. AIAA Paper 94-2323, presented at the 1994 AIAA Fluid Dynamics Conference, Colorado Springs, CO. ...

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• XFree86/OS2 Available Ported Software - Libraries
• XFree86/OS2 Available Ported Software
• XFree86/OS2 Available Ported Software - Window Managers