... Algorithm & . Format requirements . ... SDPsite is a tool for identification of protein active and other functional sites, based on spatial clustering of SDPs (specificity-determining positions, described here ) with CPs (conserved positions). ... Mapping predictied positions onto structure and construction of the best cluster . ... The input data of the algorithm are a multiple protein alignment divided into specificity groups . ... is called statistical significance of the set of k* positions . ...

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Previous article . Next article . ... The number of generators of a crystallographic space group . ... of a minimal generator set of a space group G , a numeric parameter Q called critical coordination number was constructed. ... was calculated for trimetric space groups. ... Moscow University Chemistry Bulletin . 2012, Vol. ... Copyright (C) Chemistry Dept., Moscow State University, 2002 . ... Copyright (C) Chemisty Department of Moscow State University . ...

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• PC Crystal Chemistry Analysis of Organic Crystal Structures

This home page belongs to small group of scientists working at . Sternberg Astronomical Institute which is a part of Moscow State University . ... Электронная библиотека научно-технической и художественной литературы (доступна только из ГАИШ) . ... Local staff . Dr. Edward Kononovich (konon -at- sai.msu.ru), Associate Professor . ... Dr. Sergey Ayukov (asv -at- sai.msu.ru), Research Fellow, Webmaster of the group . ... Joint seminar of Solar Studies Structure Group and Solar Photometry Group . ...

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A survey of algorithms for constructing a Delaunay triangulation" . A.V. Skvortsov . A large number of widely used algorithms for constructing a Delaunay triangulation are considered. ... Several procedures for checking the Delaunay condition and for the triangulation merging are described. PostScript (in Russian) (1734KB) . PDF (in Russian) (585йB) . PostScript. zip (in Russian) (434йB) . PDF. zip (in Russian) (372йB) . A.V. Skvortsov e-mail: skv@csd.tsu.ru ...

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• "Algorithms for constructing triangulations with constraints"
• "Sets in the tool environment for developing program modules"
• "Transformation of problems of computational mathematics onto the architecture

... wLake 1.7 . wLake is a tool which allows to identify clusters of a structural water molecules in given superimposed 3D structures. Put your coordinates in PDB format into the text area. Select a distance threshold. Two water molecules from different structures will be concidered as located in the same space point if the distance between centers of oxygen atoms is less than this threshold. ... EACH STRUCTURE INCLUDING ITS WATER MOLECULES MUST BE PRESENTED AS SEPARATE MODEL: EXAMPLE. ...

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• Geometrical core

... Structure and properties of chimeric small heat shock proteins containing yellow fluorescent protein attached to their C-terminal ends. ... Recombinant chimeras of small heat shock proteins (sHsp) HspB1, HspB5, and HspB6 containing enhanced yellow fluorescent protein (EYFP) attached to their C-terminal ends were constructed and purified. Some properties of these chimeras were compared with the corresponding properties of the same chimeras containing EYFP attached to the N-terminal end of sHsp. ...

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• Biochemistry Department of Moscow State University | Regulation of muscle

Study of jet transverse structure with CMS experiment at 10 TeV Natalia Ilina (ITEP, Moscow) for the CMS collaboration CMS PAS QCD-08-002 (2009) 1 LOMONOSOV09, MSU, Moscow 24/08/2009 Outline 1. ... 7 LOMONOSOV09, MSU, Moscow 24/08/2009 Monte Carlo predictions HERWIG++ Particle level Jet transverse structure for all jets (black lines) depends on while it does not depend on for gluon and quark jets. ...

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• http://nuclphys.sinp.msu.ru/school/s08/s08_20.pdf

... Mathematical models and methods in VLSI design . ... General models and statements about the complexity of combinatorial tasks, methods for development of fast algorithms (method of dynamic programming, ?divide and conquer?, ?method of model extension?) are considered. ... Mathematical models of contemporary electronic circuits are considered and basic approaches to solving task of logic synthesis, as well as tasks of VLSI modules placement and interconnection routing are described. ...

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... The suggested algorithm tries to solve the problem of the detection of hydrophobic clusters corresponding to spatial areas occupied exclusively or mainly by non-polar groups of atoms, in a given 3D structure of protein or macromolecular complex. ... The vertices of each connected component that contains not less than m non-polar groups form a hydrophobic cluster. ... The found hydrophobic clusters, ordered in accordance to the number of non-polar groups, form the output of the algorithm. ... PHE . ...

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• About authors ot this complex
• ETS numeration assumed
• ETS_all_contacts alignment

A program for alignment of structures of DNA-protein complexes . ... Help . ... StructAlign is a program for alignment of DNA-protein complexes' structures. The program gets a pair of complexes of DNA double helix with proteins in PDB-format and optionaly names of protein chains and outputs an alignment of DNA chains corresponding to the best spatial fit of protein chains also in PDB-format. ... X-axis is directed from P atom to C1' atom. ...

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• ConClus

Электронная библиотека Попечительского совета . ... Peters C.A., Steenbrink J.H. - Mixed Hodge Structures . ... Название: Mixed Hodge Structures . Авторы: Peters C.A., Steenbrink J.H. Язык: . ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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• Preiss B. - Data Structures and Algorithms With Object-Oriented Design Patterns
• Mehlhorn K., Sanders P. - Algorithms and data structures. The basic toolbox ::
• G?nther A. - Large-scale Structures in Rayleigh-Benard Convection and Flow Over

Protein 3D architectures and structural motifs: automated annotation E.A. Aksianov1, A.V. Alexeevski 1 2 1,2 Belozersky Institute, Lomonosov Moscow State University, Leninskie Gori 1, Moscow, Russia Scientific Research Institute for System Studies (NIISI RAN), Moscow, Russia evaksianov@gmail.com, aba@belozersky.msu.ru Description of a protein 3D structure in terms of structural domains, architecture, topology and structural motifs is a hard problem. ... The core is extended by small -sheet (unit_3). ...

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• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/161.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/237.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/167.pdf

... Hamiltonian Systems and the Generation of Vortex Structures in Fluid Motion . ... It followes in this case that there exists the coordinate system such that the evolution of two of the coordinates is governed by a time-dependent Hamyltonian system with the evolution of remaining coordinate being governed by a first order differential equation that depends only on the other two coordinates and time. ... The process of arising, evolution and disappearance of the vortex structures is described. ...

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... Research programm of the laboratory-chair< . ... Laboratory-chair of Discrete mechanics on a microscopic scale . ... Thus the structures of the physical world are not physical objects but physical processes. ... The primitive entity is called a material point. ... The value of the property ?existence? of the material point varies from ?the material point does not exist? to ?the material point exists? by this process. ... Let call this structure a dynamical graph or a d-graph. ...

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• A. P. LEVICH, A. V. SOLOV?YOV. CATEGORY-FUNCTOR MODELLING OF NATURAL SYSTEMS
• Russian Interdisciplinary Temporology Seminar
• Laboratory-Division Quantum Electrodynamics of Self-Organizing Systems and

An Approach to Finding and Refinement Planes in 3D Points Cloud, Obtained Under 3D Recovery from Image Set Ekaterina V. Semeikina*, Dmitry V. Yurin * ** Moscow State University, Faculty of Computational Mathematics and Cybernetics, Lab. of Mathematical Methods of Image Processing. ... Inputs of the algorithm are a set of images (Figure 1), feature points founded on them, established correspondences between points, recovered 3D coordinates of these points (Figure 4) and their errors estimates. ...

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• http://imaging.cs.msu.ru/pub/2009.Graphicon.Nasonov_Krylov.Ringing.en.pdf
• http://imaging.cs.msu.ru/pub/2011.ICIAR.Sorokin_Mizotin_Krylov.GaussLaguerreKeypoints.en.pdf
• http://imaging.cs.msu.ru/pub/2012.CISP-BMEI.Nasonov_Krylov.TextSR.en.pdf

Brain Research Group >> Research >> Change-point analysis ... << previous next >> . ... This section presents the results of the application of the methodology described in the previous section to real EEG signal. ... Fig. 7.1. Detection algorithm adapted for the EEG analysis . The EEG (a) was filtered in the alpha band (bandpass 7.5--12.5 Hz) (b) and then the amplitude squared (c); the result is the sequence from which the subintervals are cut out at further steps. ...

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• Analysis of change-point synchronization in multi-channel EEG
• Other prospects of the change-point based analysis
• Conclusion

... pair_cores/web/approot/locales/pair-cores-web.xml pair_cores/web/approot/locales/pair-cores-web_ru.xml pair_cores/web/pair-cores.cpp . ... 2.1 --- a/ pair_cores / web / approot / locales /pair-cores- web _ru.xml Fri Jan 11 18:28:45 2013 + 0400 2.2 +++ b/ pair_cores / web / approot / locales /pair-cores- web _ru.xml Fri Jan 11 19:58:32 2013 + 0400 2.3 @@ -28,6 +28,57 @@ 2.4 2.5 message id='pair.main.Refresh' Обновить / message 2.6 message id='pair.main.Reset' Сбросить / message 2.7 + ...

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• allpy: 6a50c2042d0e
• allpy: 5091fef2ad88 lib/project.py
• allpy: 6a50c2042d0e allpy/graph.py

... Online Services | ... Construct your query and output by sequental openings of needed fields. One output field must be selected (not be blank) at least. ... Query parameters: . Select for output . ... Energy (keV) . ... Y D H M S MS US NS PS FS AS EV KEV MEV or Stable . ... Energy of the ?-ray (keV) . ... Energy parameters of nucleus (B , Alpha energy, N, P separation energy) . ... Neutron separation energy (keV) . Proton separation energy (keV) . ... Excited energy(keV) . ...

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RIDGE AND TREE FEATURE DETECTION ON IMAGES A. Levashov 2, D. Yurin3 2, 3 1 Laboratory of Mathematical Methods of Image Processing Faculty of Computational Mathematics and Cybernetics Lomonosov Moscow State University Leninskie Gory, Moscow 119991, Russia 2 alexeylevashov89@gmail.com , 3yurin@cs.msu.ru In this article a new ridge detector with improved non-maxima suppression procedure in scale-space is proposed. ... The algorithm is tested on synthetic, landscape and medical images. ...

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Databases (NSDC) of the Natural Planetary Satellites. ... NSDC: Database of astrometric observations of Natural Planetary Satellites . ... They are thoroughly looking for observations in different sources, creating their owndatabases which are then mostly inaccessible to other researchers. ... In the file "content" with explications, the reference is given to the data source as well as the bibliographic reference. ... Data sources. ... Why a specific bibliographic database for Natural satellites? ...

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• Proposing a METI Institute
• Y.Kupryakov, SAI, MSU
• Technical Details