... Computer software has been developed for crystal chemistry analysis of arrangement of molecules in organic crystals on the basis of concepts worked out in the studies conducted by P.M.Zorky et al. ... The standard crystal chemistry analysis includes: . ... Constructing various graphic representations of the crystal structure and of its fragments, which clearly demonstrate arrangement of molecules, in particular, constructing representations of the most close molecule-molecule contacts. ...

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• Moscow University Chemistry Bulletin Vol. 42, No. 2, P. 95 (2001)

Databases (NSDC) of the Natural Planetary Satellites. ... NSDC: Database of astrometric observations of Natural Planetary Satellites . ... They are thoroughly looking for observations in different sources, creating their owndatabases which are then mostly inaccessible to other researchers. ... In the file "content" with explications, the reference is given to the data source as well as the bibliographic reference. ... Data sources. ... Why a specific bibliographic database for Natural satellites? ...

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S .. ... a database of structures of DNA-protein and RNA-protein complexes. ... a program for finding hydrophobic clusters in 3D structures of macromolecules . ... search of conserved hydrophobic clusters in aligned 3D structures of protein families . ... a program for analysis of multiple alignments . ... a program for automatic detection of aligned blocks in a multiple protein alignment. ... a program for detection of aligned blocks in a multiple alignment of sequences of PDB chains. ...

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• Molecular biology databases
• About COGs
• About this project

XAFS spectroscopy is widely used in physics, materials science, chemistry (especially in catalysis and coordination chemistry), biology, geochemistry and environmental science. ... This is an interface to the Glimpse -based search engine which enables you to find published papers in different fields of x-ray absorption spectroscopy -- XAFS, EXAFS, XANES, NEXAFS, SEXAFS, XEOL, and EXAFS-like phenomena in photoemission, electron-energy-loss spectra and so on. ... Database Search Form . ...

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LINCKS . LINCKS is an object-centred multi-user database system developed for complex information system applications where editing and browsing of information in the database is of paramount importance. ... http://www.ida.liu.se/~lincks/ . ... UNIX/X11R5, Sun 4's. Also tested on various system including Linux. ... Mailing Lists/USENET News Groups: . Mailing list information at http://www.ida.liu.se/~lincks/#mailing . ... SAL Home | Database Systems | Object-Oriented DBMS . ...

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• Full Text Search in databases
• SAL- Database Systems - Utilities Other DBMS - ObjecTrieve
• SAL- Other Scientific Fields - Chemistry, Biology Related - HMMER

... Algorithm & . Format requirements . ... SDPsite is a tool for identification of protein active and other functional sites, based on spatial clustering of SDPs (specificity-determining positions, described here ) with CPs (conserved positions). ... Mapping predictied positions onto structure and construction of the best cluster . ... The input data of the algorithm are a multiple protein alignment divided into specificity groups . ... is called statistical significance of the set of k* positions . ...

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The files containing information about Affymetrix microarrays were downloaded from the official Affymetrix site. ... Probe sequences were mapped to the genome using Blat. ... The hits found "probe alignment regions" were . ... We annotated each probe alignment region using the mRNA and EST alignments provided by UCSC, considering only . ... The textual part of the interface consists of probe information section, probe alignment section and transcription state . ... Each gene and each probe alignment . ...

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• Geometrical core
• wLake program homepage

... For instance, approximately 90% and 40% of genes in primate genomes contain at least one intron with length more than 1 kbp and 10 kbp, respectively. The existence of extremely long introns have been of interest for a long time and different studies about intron length have been done. ... Average intron length, bp Number of intron groups 7 7 7 6 5 2 400-1000 1000-2000 2000-4000 4000-8000 8000 16000 over 50000 We have compared the phases and lengths of the aligned introns. ...

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• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/202.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/66.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/178.pdf

... If there's no significant multiple alignment , including the sequence, that you interest, then the secondary structure is built, using only the energy model (just the potential energy of the system is minimized), but very often such method will give unreliable results. ... It should be mentioned that by default, at alignment case, the RNA secondary structure will be predicted for the first sequence of the alignment. ... It is done through optimizing, not the real, but model energy of the structure. ...

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• Databases
• Notes on searching by similarity
• Fasta3 help

... About Trac . ... Trac uses a directory structure and a database for storing project data. ... A new Trac environment is created using trac-admin : $ trac-admin /path/to/myproject initenv . ... For example, to connect to a PostgreSQL database on the same machine called trac , that allows access to the user johndoe with the password letmein , use: postgres://johndoe:letmein@localhost/trac . ... Note: don't confuse a Trac environment directory with the source code repository directory. ...

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• page of Dovgan Kirill

... Laboratory of Mathematical Methods of Image Processing . ... Image analysis . ... Ringing effect . ... It can be efficiently used as a post-processing method for global image deblurring methods . ... Development of edge width estimation algorithm is important for image enhancement and image quality analysis methods. ... Ringing effect so known as Gibbs phenomenon in mathematical methods of image processing is the annoying effect in images and video appeared as rippling artifact near sharp edges. ...

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• Ringing analysis - database | Laboratory of Mathematical Methods of Image
• Ringing effect modeling | Laboratory of Mathematical Methods of Image...
• Ringing analysis | Laboratory of Mathematical Methods of Image Processing

... We consider now change-points in different components of the frequency spectrum of typical EEG signal. ... Only few change-points in power are found in the initial EEG (unless a prominent alpha rhythm is present). ... Change-points in different frequency components of the EEG . ... Change-points in different types of the EEG alpha activity without substantial gradual changes . ... As can be seen from Fig. 7.3, the program reliably detected the change-points despite of such variety of signal patterns...

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• Other prospects of the change-point based analysis
• Unsolved problems and new prospects
• Analysis of change-point synchronization in multi-channel EEG

... 3 Basic «metaphisics» Systemic nature of morphological disparity (BD) BD structure is interrelation among BD forms Structural approach to BD investigation implies analysis of interrelations among BD forms Systemic nature of BD presumes that interrelations among BD forms are in part causal At least some of BD forms could constitute a part of causulities affecting certain properties of some other BD forms 4 Basic «metaphisics» ...

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• The structure of voice signals of Siberian chipmunk (Tamias sibiricus Laxmann
• Biochemical analysis of the metabolism of small rodents living in different

Home . Database of structures of nucleic acid - protein complexes . ... List of complexes . Pfam families . SCOP families . Interaction classes . ... NPIDB . ... Information on SCOP and Pfam domains detected in protein chains is presented. ... Each family has its own web page with the list of entries that include domains of the family. ... List of SCOP domains occurred in DNA-protein and RNA-protein complexes is organized in tree-like form, according to the SCOP classification. ...

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• NPIDB: About Us

Data structuring and formalization in the hybrid database on molecular spectral constants (ISMOL)" . Kochikov I.V., Kuramshina G.M., Samkov L.M., Sharapov L.A., Sharapova S.A. This paper presents the principles of data representation and structuring in the information system ISMOL - a hybrid database on molecular constants of organic compounds existing in raw oil and its refinement products. ... Kochikov I.V. e-mail: kochikov@tm-net.ru . Kuramshina G.M. e-mail: kuramshi@phys.chem.msu.ru . ...

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• "Shockwave structures in real gases: transition between shock interactions of
• "Modeling of interaction between a moving structure and a fluid flow using
• "Programming using standardized algorithmic structures with massive...

Электронная библиотека Попечительского совета . ... G?nther A. - Large-scale Structures in Rayleigh-Benard Convection and Flow Over Waves . ... Название: Large-scale Structures in Rayleigh-Benard Convection and Flow Over Waves . ... An experimental investigation is carried out on large-scale structures of the fluid velocity and temperature in the turbulent flow over a heated, wavy surface. ... for the flow over heated waves. ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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• de Floriani L. - Shape Analysis and Structuring :: Электронная библиотека
• Goil S., Choudhary A. - High Performance Multidimensional Analysis and Data
• Siau K. - Research Issues in Systems Analysis and Design, Databases and

... Minimal size of Clud clusters (residues) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Hydrophobic cluster of a single protein structure is a separated pool of nonpolar atoms. Usually there is the biggest cluster in the protein called hydrophobic core. ... ConClus program is able to detect of conservative hydrophobic clusters for a family of related protein domains or just for a set of aligned proteins. ...

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• Align tool for DNA-protein complexes

... PbTe, SnTe, GeTe and their solid solutions are narrow-gap semiconductors widely used in infrared optoelectronics and for thermoelectric energy conversion. ... The present work is a continuation of recent EXAFS studies performed at the NSLS on GeTe, SnTe and PbTe crystals doped with high concentration of indium (10-35 at.% ... The studied samples were PbTe, SnTe and GeTe doped with 1.5-2% of indium along two sections (InTe and In 2 Te 3 ) of the phase diagrams. ... Results of data analysis. ...

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... Online Services | ... Construct your query and output by sequental openings of needed fields. One output field must be selected (not be blank) at least. ... Query parameters: . Select for output . ... Energy (keV) . ... Y D H M S MS US NS PS FS AS EV KEV MEV or Stable . ... Energy of the ?-ray (keV) . ... Energy parameters of nucleus (B , Alpha energy, N, P separation energy) . ... Neutron separation energy (keV) . Proton separation energy (keV) . ... Excited energy(keV) . ...

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• CDFE => Useful links

Next: Reverse Lookups Up: The Domain Name System Previous: Domain Name Servers . We have seen above that DNS does not only deal with IP-addresses of hosts, but also exchanges information on name servers. ... A single piece of information from the DNS database is called a resource record , or RR for short. ... Figure- shows a part of the domain database that is loaded into the name servers for the physics.groucho.edu zone. ... This comprises, for instance, the default time-to-live for all records. ...

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• NIS versus NIS+
• The DNS Database Files
• MySQL Reference Manual for version 3.23.10-alpha. - 19 Solving some common