... help . ... allpy/util.py utils/markup_to_file.py . ... allpy/util.py . ... 2.1 --- a/utils/ markup _to_file.py Sun Jun 10 16:08:47 2012 +0400 2.2 +++ b/utils/ markup _to_file.py Thu Jun 14 19:05:28 2012 +0400 2.3 @@ -3,51 +3,53 @@ 2.4 import sys 2.5 import optparse 2.6 import copy 2.7 -from allpy import protein, markups 2.8 +from allpy import protein, markups, util 2.9 2.10 -parser = optparse.OptionParser() 2.11 - parser.add_option ( --input- format , default= markup , 2.12 - ...

Еще в разделе: (Показать все результаты (>112302) - kodomo.fbb.msu.ru/ )

• allpy: 3a216769da26
• allpy: b556c96c6719 utils/markup_to_file.py
• allpy: 5f0c15a3cbca

... Recommended values . Start word length . Start length of motiff for Multiple sequence alignment. ... Max N Mismatches . ... Min score . ... Gap parameter . This parameter defines gap scoring. the grater this value is the stronger gap will be panalysed . ... If inforation content of a column is less than given value the column should be not included into alignment. the grater this value is the stronger gap will be panalysed . ... Max loop . Max energy of a helix . ... cgcatagctc cacca . ...

Еще в разделе: (Показать все результаты (>145) - bioinf.fbb.msu.ru/ )

• SDPsite - Algorithm Format requirements
• SDPsite
• SDPlight

... TreeTop - Phylogenetic Tree Prediction . The source sequence multiple alignment could be formed from low and upper case letters. Upper case letters will show that there is a homology between correspondent fragments in alignment. ... Tree and Picture Options . Extra tree format . None Phylip Phylip (multiline) Nexus Nexus (TREES block only) Hennig86 . ... None Slanted Slanted 2 Rectangular Rectangular 2 Phylogram Unrooted Unrooted 2 . ... Alignment . Alignment example: . ...

Еще в разделе: (Показать все результаты (>200) - www.genebee.msu.ru/ )

• Multiple alignment
• MUSCLE 3.6
• GeneBee ClustalW 1.83

The NTP standard specifies an extension which provides cryptographic authentication of received NTP packets. ... The specification allows any one of possibly 4 billion keys, numbered with 32-bit key identifiers, to be used to authenticate an association. ... In the case of MD5, the keys are 64 bits (8 bytes). xntpd reads its keys from a file specified using the -k command line option or the keys statement in the configuration file. ... A zero key in NTP format would be specified as 8080808080808080 . ...

Еще в разделе: (Показать все результаты (>5311) - www.sai.msu.su/ )

• SAL- Numerical Analysis - Discrete Methods Related Tools - ipol
• SAL- Other Scientific Fields - Chemistry, Biology Related - NJplot
• SAL- Computer Graphics, Images Signals - CAD, Drawing Painting Tools - XPaint

... If you have been using a tool such as the line drawing tool which does not allow you to select other objects, you can use this menu item to return to the normal selection cursor. ... This puts a colored copy of either text or a drawn object behind it. ... Your options are color , (which lets you set either a plain color or one of many gradients) Clipart (which gives a dialog box to let you find your clipart on your hard drive) or picture , which again gives a dialog box to find the picture you want....

Еще в разделе: (Показать все результаты (>979) - uneex.lorien.cs.msu.su/ )

• Query Mode
• dbmmanage - Manage user authentication files in DBM format - Apache HTTP Server
• Check Signature Mode

... TOPICLIST{" <option>$name</option>"}% creates an option list (for drop down menus). ... Web index, e.g. list of all webs. ... WEBLIST{" $name " webs="Trash,public" selection="TWiki" separator=" "}% Dropdown of all public Webs + Trash Web, current Web highlighted. ... List of users and groups who are allowed to change the current topic. ... List of users and groups who are not allowed to rename topics in the TWiki web. ... List of users and groups who are allowed to rename topics in the TWiki web. ...

Еще в разделе: (Показать все результаты (>41074) - dualopt1.cmm.msu.ru/ )

• %TOPICTITLE% (10 vs. 11) - TWiki
• %TOPICTITLE% (12 vs. 13) - TWiki
• %TOPICTITLE% (1 vs. 2) - TWiki

. SDPpred: a tool for prediction of amino acid residues . that determine differences in functional specificity of homologous proteins .

Еще в разделе: (Показать все результаты (>6336) - monkey.belozersky.msu.ru/ )

• SVETKA, a program for multiple sequence alignments analysus
• SVETKA, a program for multiple sequence alignments analysis
• About this project

... help . find changesets by author, revision, files, or words in the commit message Template Usage Mercurial allows you to customize output of commands through templates. ... Usage: $ hg log -r1 --style changelog A template is a piece of text, with markup to invoke variable expansion: $ hg log -r1 --template "{node}\n" b56ce7b07c52de7d5fd79fb89701ea538af65746 Strings in curly braces are called keywords. ... The changeset bisection status. bookmarks List of strings. ...

Еще в разделе: (Показать все результаты (>8974) - kodomo.cmm.msu.ru/ )

• TracFineGrainedPermissions тАУ Tanchiki
• TracModWSGI тАУ Tanchiki
• Help: export

... bool printer_set_option ( resource handle, int option, mixed value) . ... PRINTER_MODE : specifies the type of data (text, raw or emf), value must be a string. ... PRINTER_PAPER_FORMAT : specifies the a predefined paper format, set value to PRINTER_FORMAT_CUSTOM if you want to specify a custom format with PRINTER_PAPER_WIDTH and PRINTER_PAPER_LENGTH. value can be one of the following constants. ... PRINTER_FORMAT_LETTER : specifies standard letter format (8 1/2- by 11-inches). ...

Еще в разделе: (Показать все результаты (>611) - oit.cmc.msu.ru/ )

• Forms Data Format functions
• How Directory, Location and Files sections work
• make_smbcodepage (1)

SVETKA, a program for Analysis of Multiple Sequence Alignments . ... Analyse your alignment . ... Alignment . Nota Bene! .aln or .fasta format required!! Look here for comments . ... Nota Bene! Special scheme format required! ... Development of the program is supported by Ministry of Education and Science of the Russian Federation (State Contract No. ...

Еще в разделе: (Показать все результаты (>6990) - mouse.belozersky.msu.ru/ )

• wLake program homepage
• Blocks finder

... Apache HTTP Server Version 2.0 . Apache > HTTP Server > Documentation > Version 2.0 > Programs . ... dbmmanage is used to create and update the DBM format files used to stor