Application of evolutionary model in the evaluation of the quality of pair wise alignment of amino acid sequences Valery Polyanovsky, V. G. Tumanyan Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, 119991 Russia ... : polyanovskyvo@mailfrom.ru, tuman@eimb.ru The purpose of the work is to develop a universal method for estimating the pairwise alignment quality depending on the evolutionary distance (degree of homology) between the ... REFERENCES 1. ...

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... We obtained 20 complete cytochrome b sequences (1140 bp) of Meles leucurus from the Korean Peninsula (mainland Korea and Jeju Island), Russian Far East, and Mongolia, and these sequences were compared to complete and partial (629 bp) sequences of M. leucurus , obtained from GenBank, in order to reexamine genetic differentiation among M. leucurus from Korea, Siberian and Far-eastern Russia, Mongolia, and China. ...

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... Normative references . ... Download from ftp://ds.internic.net/rfc/rfc1123.txt . ... Download from ftp://ds.internic.net/rfc/rfc1468.txt . ... Download from ftp://ds.internic.net/rfc/rfc1555.txt . ... Download from ftp://ds.internic.net/rfc/rfc1556.txt . ... Download from ftp://ds.internic.net/rfc/rfc1590.txt . ... Download from ftp://ds.internic.net/rfc/rfc1738.txt . ... Download from ftp://ds.internic.net/rfc/rfc1766.txt . ... For more information, consult http://www.iso.ch/cate/d4766.html . ...

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... HELP ON SCREENING PROTEIN SEQUENCE AGAINST PROSITE DATABANK . ... One of the methods to select the functionally important protein sequence fragment is to compare the sequence with PROSITE databank, that collects all patterns (rules of the sequence fragment construction) for biochemically important protein fragments along with it's description. ... The method of screening is described in Biochemistry (Moscow) (Brodsky L. et al., v.60, №8, pp. ... QUERY SEQUENCE: (should be in one-letter code format):...

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DVM debugger - contents . Part 1 (1 - 4) . ... Writing to read-only variable is detected. ... Using non-initialized element <elem> . ... Using variable <var> before asynchronous reduction competed . ... The dynamic debugger detects access to a shadow element before asynchronous shadow renew competed . ... It is reported when any non-correspondence of trace or loop description file is detected. ... Different values of reduction operation are detected for current event and in reference trace record. ...

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The QStrIList class provides a doubly linked list of char* with case insensitive compare. ... QStrIList  ( bool deepCopies=TRUE )  . ... This class is a QList <char> instance (a list of char*). QStrIList is similar to QStrList except that it is case insensitive. The virtual compareItems () function is reimplemented and does a case insensitive string comparision. ... This file is part of the Qt toolkit , copyright 1995-98 Troll Tech , all rights reserved. ... qstrlist.h: 1998/07/03 . ...

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... Glossary of the laboratory-chair . ... Institute Laboratory-Chairs . ... Laboratory-chair of modelling the natural references of time . ... All natural systems are considered as hierarchic systems. ... These flows are called generating flows. ... The union of all sets of elements of a system's generating flows is considered as its space or medium. ... The formation, or the course of time, in systems is considered as changing the amount of substance of some generating flows in these systems. ...

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... In this program there will be no charts in which to compare starfields or conduct magnitude comparison star photometry. The latter information will hopefully be made available once an event has been sanctioned by the IAU as being a bonifide event. ... NOTE: The Astronomical Society of the Pacific has just come out with a further scaled down version of the Digitized Sky Survey that is currently available (10X version). ...

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Maximum RPM: Taking the Red Hat Package Manager to the Limit . ... While it's certainly no problem to add a prefix tag line to a spec file, it's necessary to consider a few other issues: . ... Other software must not rely on the relocatable package being installed in any particular location. ... The fact that every file in a relocatable package must be installed under the directory specified in the prefix line, raises some issues. ... Set the prefix to /etc and package everything under /etc . ...

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... Classes and Objects . ... Creating references within the constructor can lead to confusing results. This tutorial-like section helps you to avoid problems. class Foo { function Foo($name) { // create a reference inside the global array $globalref global $globalref; $globalref[] = &$this; // set name to passed value $this->setName($name); // and put it out $this->echoName(); } function echoName() { echo "<br>",$this->name; } function setName($name) { $this->name = $name; } } . ...

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... Электронный журнал "Компьютерная графика и мультимедиа" . ... Roadway video passport systems are widely-used for detailed road mapping which allows roadway quality monitoring and repair planning. ... Typical roadway images are strongly differed to each other in colors and texture, some examples are shown below. ... We use so-called rectified images of the road covering. ... When preprocessing is completed our algorithm is trained on a part of rectified road image with the help of user input. ...

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... Available at http://www.hike.te.chiba-u.ac.jp/ikeda/CIE/publ/abst/15-2-86.html . ... Available at http://www.w3.org/TR/REC-CSS1-961217.html. ... HTML 4.0 Specification", D. Raggett, A. Le Hors, I. Jacobs, 8 July 1997. ... Available at ftp://ftp.internic.net/rfc/rfc1700.txt. ... Available at ftp://ds.internic.net/rfc/rfc1808.txt . ... Available at ftp://ds.internic.net/rfc/rfc2070.txt . ... Available at ftp://ds.internic.net/rfc/rfc2119.txt . ... Available at ftp://ds.internic.net/rfc/rfc2318.txt . ...

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... A collection of one-page primers on putting TWiki to work for you. ... NOTE: When installing TWiki, you can easily split up this page into separate user and administrator topics. Also, you can quickly edit the User's Guide pages to fit the features and access settings of your TWiki site. ... WebChangesAlert : Get email alerts with the latest page changes . ... WebChangesNotify : Get email alerts with the latest page changes . ... HandlingTopics : Rename, move, or delete TWiki pages . ...

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Электронная библиотека Попечительского совета . ... Eijkhout V. - TeX by topic, a texnician's reference . ... Название: TeX by topic, a texnician's reference . Автор: Eijkhout V. Аннотация: . For readers already familiar with the TEX computer typesetting system, but have specific questions or want to explore advance features. A reference manual designed to complement tutorial guides. ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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Nominal modification at the Syntax-Semantics Interface: comparing attributive adjectives in Italian and English In his seminal work, Bolinger (1967) discusses an asymmetry between two functions that adjectives can perform, namely attributive and predicative modification; furthermore, he points out that the syntactic asymmetry between the pre- and the post-nominal position of a number of adjectives in English is related to a semantic difference between reference- and referentmodification, respectively. ...

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download:main ]] . CompHEP . ... Latest versions . ... This Licence entitles the Licensee (one person) and the Licensee's research group to obtain a copy of the source or executable code of CompHEP and/or interfaces of CompHEP to other Monte-Carlo generators and to use the acquired program for academic research or other non-profit purposes within a research ... Source codes of CompHEP, v4.5.2 (release candidate 12) . ... Source codes of CompHEP, v4.4.93 (preliminary test version of 4.5.0) . ...

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Firefly (previously known as the PC GAMESS) is a freely available ab initio and DFT computational chemistry program developed to offer high performance on Intel-compatible x86, AMD64, and EM64T processors. ... At moment, Firefly includes no more than 5% of the legacy code. ... Firefly is freely available for all main PC operating systems: Windows, Linux, and Mac OS X. Firefly supports various Windows versions including Windows 8, Windows 7, Windows Server 2008, Vista, 2003, XP, 2000, NT, and 98/Me. ...

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log . ... Fri, 21 Jan 2011 17:01:21 +0300 . Daniil Alexeyevsky . ... Thu, 20 Jan 2011 22:31:37 +0300 . ... Changed names & docstrings of classes in allpy.pdb to identify their mixinity. (closes #13) . Wed, 19 Jan 2011 20:33:51 +0300 . ... Sat, 18 Dec 2010 00:17:48 +0300 . ... Fri, 17 Dec 2010 20:54:35 +0300 . ... Thu, 16 Dec 2010 23:45:57 +0300 . ... Moved leftover junk from allpy.base to allpy.pdb . ... Changed interfaces of allpy.fasta, updated allpy.base accordingly . ...

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... Science . ... lrm@cs.msu.su . ... The Laboratory of Difference Methods was founded by A.A.Samarsky, Academician of RAS, in the middle of the 60s. For more than 50 years the Laboratory?s theoretical research has been focused on numerical methods for problems described by systems of partial differential equations. ... N.V.Ardelyan, V.L.Bychkov, I.V.Kochetov and K.V.Kosmachevskii, Non-self-maintained discharge plasma in propane-air mixture // IEEE Trans. on Plasma Science, vol. 39. no. 12, part 1, pp. ...

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О лаборатории . ... Лаборатория теоретической биофизики . ... Posted by comcon1 in Без рубрики . ... PyMol is a powerful drawing instrument and here we show how to plot Fukui function with PyMOL after two calculation steps with FireFly (PC-GAMESS). continue reading.. ... To build topology for the new molecule partial charges for atoms should be determined. ... OPLS-AA patch for different types of molecules . ... comcon1 in All-atom automatic OPLS-AA topology? . ... 2012 ERG Research Group . ...

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