... Alternative core new atoms (%) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Geometrical core of a set of structures is a subset of alignment positions those atoms are disposed similarly in all structures. ... For any two positions included into geometrical core, the distances between CA atoms of those positions in all structures may differ not more than the value of the parameter "Distance spreading". ...

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Databases (NSDC) of the Natural Planetary Satellites. ... NSDC: Database of astrometric observations of Natural Planetary Satellites . ... They are thoroughly looking for observations in different sources, creating their owndatabases which are then mostly inaccessible to other researchers. ... In the file "content" with explications, the reference is given to the data source as well as the bibliographic reference. ... Data sources. ... Why a specific bibliographic database for Natural satellites? ...

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... Minimal size of Clud clusters (residues) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Hydrophobic cluster of a single protein structure is a separated pool of nonpolar atoms. Usually there is the biggest cluster in the protein called hydrophobic core. ... ConClus program is able to detect of conservative hydrophobic clusters for a family of related protein domains or just for a set of aligned proteins. ...

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... Algorithm & . Format requirements . ... SDPsite is a tool for identification of protein active and other functional sites, based on spatial clustering of SDPs (specificity-determining positions, described here ) with CPs (conserved positions). ... Mapping predictied positions onto structure and construction of the best cluster . ... The input data of the algorithm are a multiple protein alignment divided into specificity groups . ... is called statistical significance of the set of k* positions . ...

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• SDPlight

Bioinf ormatic analysis of diverse protein superf amilies to design improved enzymes Dmitry Suplatov , Nikolay Panin, Tatyana Shcherbakova, Ilyas Khaliullin, Vytas Svedas Lomonosov Moscow State University, Belozersky Institute of Physicochemical Biology and F aculty of Bioengineering and Bioinformatics ... D. Suplatov, E. Kirilin, V. Takhaveev, V. Svedas (2014) Zebra: web-server for bioinformatic analysis of diverse protein families, J.Biomol.Struct.Dyn., ...

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• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/4.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/217.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/172.pdf

... There are different techniques available that may be used to achieve an effect of focusing of acoustic energy. ... Although such type of array is known, there are comparatively little available experimental data concerning the radiation of finite amplitude wave by it. The aim of the paper is to present results of examination, both experimental and numerical, of the pressure field of the arrays composed of axisymmetric areas of different structure radiating the finite amplitude wave. ...

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• Abstract (Invited)

... Форумы > Аспирантура > Тема . ... PhD position in the University of Florida . PhD position is available in the department of Industrial and Systems Engineering, University of Florida. ... Risk Management and Financial Engineering Lab website: http://www.ise.ufl.edu/rmfe/ . ... Statistical estimation in terms of factor models can be tuned to risk preferences in order to achieve better performance when applied to portfolio optimization. ... University of Florida, November 2011. ...

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... Description . Catalog . ... In the Catalog, we publish equatorial (ЮБ 2000 , ЮД 2000 ) and galactic (l,b) coordinates of cluster centers derived as the position of overdensity in 2MASS catalog (Koposov et al. ... Distances, color-excesses and ages are the mean-square values calculated using all available evaluations from different color-magnitude diagrams. ... There are individual pages for every cluster where all available plots and parameters are published. ... 2002). ...

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• SAI OCL Catalog Czernik 23
• SAI OCL Catalog Czernik 21
• SAI OCL Catalog Berkeley 97

... The first-order intermolecular perturbation theory developed in the frame of diatomics-in-molecule approach is used to calculate the potential energy surfaces of the Ar.. Cl2 complex in the states which correlate with the X0g+ and B0u+ states of Cl2 fragment. ... Laboratory of Molecular Structure and Quantum Mechanics ...

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• Peculiarities of Diffusive Transport of Water and Other Gases in Glassy and
• Moscow University Chemistry Bulletin Vol. 50, No. 6, P. 468 (2009)
• Moscow University Chemistry Bulletin Vol. 49, No. 1, P. 23 (2008)

. SDPpred: a tool for prediction of amino acid residues . that determine differences in functional specificity of homologous proteins .

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• About authors ot this complex
• About this project
• DNA/RNA-Protein structures

... Ярмарка вакансий и стажировок для студентов и выпускников вузов . ... University of Groningen, The Netherlands . PhD Position available . ... PhD Position in Theoretical Chemistry . ... She is considered to be one of top 5 universities in Europe for research in Materials Science, Chemistry, Space Science, Microbiology, and Environment/Ecology. ... In 1993, the MSCplus was accredited by the Royal Netherlands Academy of Arts and Sciences (KNAW) as a leading Research School in Materials Science. ...

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... If there's no significant multiple alignment , including the sequence, that you interest, then the secondary structure is built, using only the energy model (just the potential energy of the system is minimized), but very often such method will give unreliable results. ... It should be mentioned that by default, at alignment case, the RNA secondary structure will be predicted for the first sequence of the alignment. ... It is done through optimizing, not the real, but model energy of the structure. ...

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• Screening of pattern or alignment against PROTEIN databank

... Improvement of Java type compiler using in language independent remote process calls in KBase project. 09/2011 ­ present: Moscow State University, Dept. of Bioengineering and Bioinformatics (Russia) Scientific Research Java developer and lecturer Enhanced the CAMPS web resource (http://webclu.bio.wzw.tum.de/CAMPS2.0/) that enables multiple classification of transmembrane proteins. ... Developed web based UI for visualization of a graph of transmembrane protein families. ... Sutormin RA, Mironov AA. ...

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• http://storage.bioinf.fbb.msu.ru/~roman/mol_biol_mosk_2006.pdf
• http://storage.bioinf.fbb.msu.ru/~roman/Sutormin_CV_aug2014.pdf

Modules | ... Apache HTTP Server Version 2.0 . Apache > HTTP Server > Documentation > Version 2.0 > Developer Documentation . ... The new structure is a great deal simpler... module MODULE_VAR_EXPORT module_name _module = { STANDARD20_MODULE_STUFF, /* create per-directory config structures */ /* merge per-directory config structures */ /* create per-server config structures */ /* merge per-server config structures */ /* command handlers */ /* handlers */ /* register hooks */ }; . ...

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• Developer Documentation for Apache 2.0 - Apache HTTP Server
• Apache 2.0 Hook Functions - Apache HTTP Server

; # Date 1327437472 -14400 # Node ID 841c47a94c9e90a8d6338a5da802846c977a5f0f # Parent 0dec37632d10c7166eab8a34b5e716079f58d415 blocks3d /wt: add abstract block (rus and eng) diff -r 0dec37632d10 -r 841c47a94c9e blocks3d /wt/ blocks3d -wt.C --- a/ blocks3d /wt/ blocks3d -wt.C Tue Jan 24 22:59:54 2012 + 0400 +++ b/ blocks3d /wt/ blocks3d -wt.C Wed Jan 25 00:37:52 2012 + 0400 @@ -33,6 +33,9 @@ new Wt::WBreak( ... Для выравнивания в целом + вычислялось среднее взвешенное число ошибок ? ...

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• http://kodomo.fbb.msu.ru/hg/allpy/raw-rev/8b44c0e4edb5
• allpy: 841c47a94c9e
• allpy: b92cad794578 test/usecase2.py

... The pivotal role of the beta 7 strand in the intersubunit contacts of different human small heat shock proteins. ... It is concluded that the beta 7 strand participates in the intersubunit interaction of four human small heat shock proteins (alpha B-crystallin, HspB1, HspB6, HspB8) having different structure of beta2 strand of alpha-crystallin domain and different length and composition of variable N- and C-terminal tails. ...

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• Effect of mutations in the beta5-beta7 loop on the structure and properties of
• Structure, properties, and probable physiological role of small heat shock
• Effect of mutations mimicking phosphorylation on the structure and properties

... G. K. Zhavnerko, V. N. Staroverov, V. E. Agabekov, M. O. Gallyamov, I. V. Yaminsky . ... Atomic force microscopy, ellipsometry, and piezoquartz microweighing techniques were used to study the characteristic of N-octadecyl-3,4:9,10-perylene-bis(dicarboxydiimide) monomolecular layers... <more> . ... The influence of the chemical structure of film-forming material, the pressure of deposition, and the nature of substrate upon the film morphology has been studied by atomic force microscopy... <more> . ...

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CGAL . The CGAL project is a collaborative effort to develop a robust, easy to use, and efficient C++ software library of geometric data structures and algorithms. The CGAL library contains: . ... License Type: Free for Academic Research and Teaching Purposes, Commercial License Available . ... http://www.cs.uu.nl/CGAL/ . http://www.algorithmic-solutions.com/ (Commercial License) . ... None . ... SAL Home | Computer Graphics, Images Signals | Misc . ... SAL@KachinaTech.COM . ...

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• SAL- Computer Graphics, Images Signals - Misc - TINA
• SAL- Other Scientific Fields - Chemistry, Biology Related - BRAGI
• SAL- Other Scientific Fields - Chemistry, Biology Related - Evalign

... Полная версия этой страницы: PhD positions in Switzerland . Студенческий форум Физфака МГУ > Физфак и учеба > Аспирантура . ... 2 PhD positions in multiscale modeling of cancer tumor induced microcirculation . ... The students will be enrolled in the graduate program in the Faculty of Informatics, and will work with Prof. Igor Pivkin on multiscale modeling of tumor induced microcirculation. ... Multiscale Modeling of Tumor Microcirculation . ... All PhD positions have a starting date January 2012. ...

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• PhD positions in Switzerland - Студенческий форум Физфака МГУ
• Студенческий форум Физфака МГУ > Ph.D and Post-Doc positions in chemical
• Студенческий форум Физфака МГУ > PhD position in Sheffield

Описание вакансии: . ... The project will focus on the structure-property/toxicity studies of different nanomaterials. ... Experience: The background in theoretical QSAR/QSPR and computational chemistry studies is essential. ... следующая вакансия . список всех вакансий . добавить вакансию . редактировать эту вакансию . ...

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• "Postdoctoral research position" - вакансия в разделе "Работа для химиков"
• "Phd position in homogenous catalysis" - вакансия в разделе "Работа для