... Initial commit with the lib modules . ... lib/block.py lib/monomer.py lib/project.py lib/sequence.py . ... lib/monomer.py . ... lib/sequence.py . ... Sequences don't contain gaps 3.22 + - see sequence .py module 3.23 + * alignment -- dict 3.24 + { Sequence object :[ Monomer object ,None, Monomer object ]} 3.25 + keys are the Sequence objects, values are the lists, which 3.26 + contain monomers of those sequences or None for gaps in the 3.27 + corresponding sequence of 3.28 + ...

Еще в разделе: (Показать все результаты (>40952) - kodomo.fbb.msu.ru/ )

• allpy: 004c2f6c45ac
• allpy: a4d7438c142f
• allpy: f8bd7c469fcf

The files containing information about Affymetrix microarrays were downloaded from the official Affymetrix site. ... Probe sequences were mapped to the genome using Blat. ... The hits found "probe alignment regions" were . ... We annotated each probe alignment region using the mRNA and EST alignments provided by UCSC, considering only . ... The textual part of the interface consists of probe information section, probe alignment section and transcription state . ... Each gene and each probe alignment . ...

Еще в разделе: (Показать все результаты (>7289) - mouse.belozersky.msu.ru/ )

• wLake algorithm description
• Index of /npidb/pdb/to_be_deleted

PHP Manual . Prev . Next . 3.0.3 - 3.0.18 only, PHP 4 >= 4.0.0) imap_clearflag_full -- Clears flags on messages . string imap_clearflag_full ( int stream, string sequence, string flag, string options) . This function causes a store to delete the specified flag to the flags set for the messages in the specified sequence. The flags which you can unset are "\\Seen", "\\Answered", "\\Flagged", "\\Deleted", "\\Draft", and "\\Recent" (as defined by RFC2060). ... sequence numbers . ...

Еще в разделе: (Показать все результаты (>2726) - oit.cmc.msu.ru/ )

• imap_setflag_full
• dba_delete
• imap_delete

... Interface description . ... 6 Distributed array creating and deleting . ... 13.4 Access to elements of local part of distributed array . 13.4.1 Requesting if array element is allocated in local part of distributed array . ... 13.4.5 Coping element of local part of distributed array to element of local part of other distributed array . 13.4.6 Requesting address of element of local part of distributed array . ... 14.5 Access to distributed array elements, allocated in remote element buffer . ...

Еще в разделе: (Показать все результаты (>170) - sp.cs.msu.ru/ )

Scoring Matrices . Matrix Sequences Sequence Consisting of the first four Amino Acids in the Protein GYRB_ECOL: . ... Sequence Achieved by Substitution of the 2nd and 4th Amino Acid and Insertion between the 3d and 4th Amino Acid, in the Protein GYRB_ECOLI, to randomly chosen new amino acids: . ... Matrix Sequences Sequence Consisting of the First Nine Amino Acids of the Protein GYRB_ECOLI: . ... Sequence Consisting of 2nd, 3d, 7th, 8th and 9th Amino Acid Residues of the Protein GYRB_ECOLI: . ...

Еще в разделе: (Показать все результаты (>6586) - kodomo.cmm.msu.ru/ )

• Множественное выравнивание.

Some additional inquiry information . ... Rule of fours . The sequences in alignment can be casual. ... But we can tell, that the more the alignment tries to satisfy the rule of fours, the better it is. ... But, according to the rule of fours, we can take 3 sums of distances between sequences (there are six distances: |AB|, ... The more is the meaning of this parameter, the more exactly the rule or fours is satisfied, and, hence, the better the considered alignment is. ...

Еще в разделе: (Показать все результаты (>1543) - monkey.belozersky.msu.ru/ )

• Inquiry information || Distances
• Inquiry information || Parsimony algorithm
• Index of /npidb/pdb/to_be_deleted

... A regular expression (regex) is a powerful way of specifying a complex search. MySQL uses regular Henry Spencer's inplementation of regular expressions. ... MySQL uses the extended version. This is a simplistic reference that skips the details. To get more exact information, see Henry Spencer's regex(7) manual page that is included in the source distribution. ... A regular expression describes a set of strings. The simplest regexp is one that has no special characters in it. ...

Еще в разделе: (Показать все результаты (>255) - itpm.msu.su/ )

• mod_disk_cache - Apache HTTP Server

... It is recommended that all lines of text be shorter than 80 characters in length. An example sequence in FASTA . ... Sequences are expected to be represented in the standard IUB/IUPAC amino acid and nucleic acid codes, with these exceptions: lower-case letters are accepted and are mapped into upper-case; a single hyphen or dash can be used to represent a gap of indeterminate length; and in amino acid sequences, U and * are acceptable letters (see below). ...

Еще в разделе: (Показать все результаты (>170) - www.genebee.msu.ru/ )

• GeneBee BLAST 2.2.8 Services Help
• GeneBee BLAST 2.2.22+ Services Help
• Genebee Predicted Annotation

Brain Research Group >> Research >> Change-point analysis ... << previous next >> . ... When detection of the change-points in alpha band power was performed as in the previous subsection, more than one change-point per second was obtained in average. ... The hypothesis of the hierarchy of EEG segmental descriptions (Kaplan 1998) (see subsection 7.3.2) is a theoretical reason for introducing the adjustment of the change-point detection probability. ...

Еще в разделе: (Показать все результаты (>37) - brain.bio.msu.ru/ )

... This sets the following variables: PERL_VERSION, SITE_ARCH, SITE_LIB, # ARCH_LIB, VENDOR_LIB, VENDOR_ARCH # # This function used to be called perlinfo as well. perl_set_version() { debug-print-function $ FUNCNAME $@ debug-print $ FUNCNAME : perlinfo_ done =${perlinfo_ done } ${perlinfo_ done } return 0 perlinfo_ ... If the pattern is found, silently replace it with `/'. perl_fix_packlist() { debug-print-function $FUNCNAME "$@" find "${D}" -type f -name '.packlist' -print0 | ...

Еще в разделе: (Показать все результаты (>43608) - mirror.msu.net/ )

• http://mirror.msu.net/pub/gentoo-portage/sci-libs/htslib/htslib-1.2.1.ebuild
• http://mirror.msu.net/pub/gentoo-portage/sci-libs/htslib/htslib-1.3.ebuild
• http://mirror.msu.net/pub/gentoo-portage/sci-biology/mafft/mafft-7.050.ebuild

... SpreadSheetPlugin (any TWiki, $Rev: 18078 (02 Sep 2009) $) : Add spreadsheet calculation like "$SUM( $ABOVE() )" to TWiki tables and other topic text . ... CommentPlugin (03 Aug 2008, $Rev: 17791 (02 Sep 2009) $) : Allows users to quickly post comments to a page without an edit/preview/save cycle . ... HeadlinesPlugin (2.3, $Rev: 18123 (02 Sep 2009) $) : Show headline news in TWiki pages based on RSS and ATOM news feeds from external sites . ... Ideas, requests, problems regarding TWiki? ...

Еще в разделе: (Показать все результаты (>41671) - dualopt1.cmm.msu.ru/ )

• GluePlugin - TWiki - TWiki
• GluePlugin - TWiki - TWiki - (printable)
• ManagingWebs - TWiki - TWiki

HMMER . The HMMER hidden Markov model software package and other software for large-scale genome analysis using probabilistic models of proteins and RNAs, from Sean Eddy's lab at Washington University, St. Louis USA. HMMER -- Hidden Markov models for sequence profile analysis. ... COVE -- an implementation of stochastic context free grammar methods for RNA sequence/structure analysis. ... SAL Home | Other Scientific Fields | Chemistry, Biology Related . ... SAL@KachinaTech.COM . ...

Еще в разделе: (Показать все результаты (>946) - www.sai.msu.su/ )

• Line Disciplines and Streams Modules
• Gadget Box PPS Level Converter and CHU Modem

The QCollection class is the base class of all Qt collections. ... virtual uint  count  () const . ... virtual GCI  newItem  ( GCI )  . ... The QCollection class is an abstract base class for the Qt collection classes QDict , QList etc. via QGDict , QGList etc. A QCollection knows only about the number of objects in the collection and the deletion strategy . ... The template (or macro) classes that create the real collections cast the GCI to the required type. See also: Collection Classes . ...

Еще в разделе: (Показать все результаты (>486) - rtm-cs.sinp.msu.ru/ )

• Qt Toolkit - QIntCache Class
• Qt Toolkit - QCache Class
• Qt Toolkit - QCloseEvent Class

This diagram shows how the 'vertical-align' properties on cells combine to determine the height of the row containing the cells. The diagram also illustrates the meaning of some values of 'vertical-align' that apply to table cells: baseline, top, bottom, and middle. The diagram shows a row of five (labeled) table cells of varying heights and alignments. ... The first cell is aligned with the row baseline and extends to just below the row top. ...

Еще в разделе: (Показать все результаты (>3957) - crydee.sai.msu.ru/ )

. Name . Last modified . Size . Description . Parent Directory . - . Apache/2.4.10 (Debian) Server at npidb.belozersky.msu.ru Port 80

Еще в разделе: (Показать все результаты (>89) - npidb.belozersky.msu.ru/ )

. Name . Last modified . Size . Description . Parent Directory . - . Apache/2.4.10 (Debian) Server at monkey.belozersky.msu.su Port 80

Еще в разделе: (Показать все результаты (>187) - monkey.belozersky.msu.su/ )

Application of evolutionary model in the evaluation of the quality of pair wise alignment of amino acid sequences Valery Polyanovsky, V. G. Tumanyan Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, 119991 Russia ... : polyanovskyvo@mailfrom.ru, tuman@eimb.ru The purpose of the work is to develop a universal method for estimating the pairwise alignment quality depending on the evolutionary distance (degree of homology) between the ... REFERENCES 1. ...

Еще в разделе: (Показать все результаты (>243) - mccmb.belozersky.msu.ru/ )

• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/104.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/20.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/161.pdf

... x264 is an open source codec of standard MPEG4 AVC/H.264, developed by programmers from all over the world. ... Accumulated during previous frames' compressions statistic is actively used by codec to improve effectiveness of adaptive models. ... These parameters are used only before encoding start, so, our improvements are more significant for short sequences. ... 3 Results of codec x264 modification on "flower" sequence . ... 5 Results of codec x264 modification on "flower" sequence, low bitrates ....

Еще в разделе: (Показать все результаты (>165) - graphics.cs.msu.ru/ )

• x264 codec improvement | Лаборатория компьютерной графики и мультимедиа
• Road monitoring | Graphics and Media Lab
• Road monitoring | Лаборатория компьютерной графики и мультимедиа

You are here: Foswiki > System Web > Macros > VarENCODE (31 Oct 2010, ProjectContributor ) E dit A ttach . Encode character sequences in "string" , by mapping characters (or sequences of characters) to an alternative character (or sequence of characters). ... Parameter type not be used if old or new are given. old="tokenlist" . Comma-separated list of tokens to replace. ... An empty element in the new list will result in the corresponding token in the old list being deleted from the string. ...

Еще в разделе: (Показать все результаты (>21747) - wiki.cs.msu.ru/ )

• UserDocumentationCategory < System < Foswiki
• PageOptimizerPlugin < System < Foswiki
• CompareRevisionsAddOn < System < Foswiki

You are here: Foswiki > System Web > Macros > VarENCODE (revision 1) E dit A ttach . Encode character sequences in "string" , by mapping characters (or sequences of characters) to an alternative character (or sequence of characters). ... comma-separated list of replacement tokens. ... Example: %SEARCH{ "%ENCODE{ "string with "quotes"" type="quotes" }%" noheader="on" }% When using old and new , be aware that the results of applying earlier tokens are not processed again using later tokens. ...

Еще в разделе: (Показать все результаты (>39623) - wiki.cmc.msu.ru/ )