... annotate . ... broken: lib::block::geometrical_core retirns block, not position list . ... BurkovBA@0 . ... 5 import project . ... 15 * self.project -- project object, which the block belongs to . ... 18 * self.positions -- sorted list of positions of the project.alignment that . ... bnagaev@112 . 28 def __init__ ( self , project , sequences = None , positions = None ): . ... 37 positions = range ( len ( project )) . ... project = project . ... bnagaev@120 . ... project , copy ( self . ...

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• allpy: bc89ae6cb86e allpy/block.py
• allpy: b2ec17578145 lib/block.py
• allpy: fb3164f03984 lib/block.py

... Criteria of branch quality . As it was repeatedly told , phylogenetic trees consist from branches. ... I. e., those positions, which can separate sequences of the branch from other sequences in the alignment. ... Measure of branch separation . ... Here and further: A - branch of the tree, i , j - sequences of alignment . ... That's why number of conserved positions in some branch should be considered in complex with the distribution of conserved positions in the whole alignment. ...

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• Inquiry information || Distances
• SDP home page
• Example of supporting positions

... Alternative core new atoms (%) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Geometrical core of a set of structures is a subset of alignment positions those atoms are disposed similarly in all structures. ... For any two positions included into geometrical core, the distances between CA atoms of those positions in all structures may differ not more than the value of the parameter "Distance spreading". ...

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... annotate . ... 6 def __init__ ( self , position , velocity , lifetime , mutated ): . ... 23 def check_collision ( self , bacteria , delta , bact_r , delta_t ): . ... 34 def move ( self , bacteria , delta_t , radius , delta , bact_r ): . ... 40 def collision ( self , other , bacteria , delta_t , radius , delta , bact_r ): . ... 52 def asexual ( self , bacteria , delta_t , radius , delta , bact_r , full_lifetime ): . ... 67 def sexual ( self , other , bacteria , delta_t , radius , delta , bact_r , . ...

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• petri_dish: tk1.py annotate

... Minimal size of Clud clusters (residues) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Hydrophobic cluster of a single protein structure is a separated pool of nonpolar atoms. Usually there is the biggest cluster in the protein called hydrophobic core. ... ConClus program is able to detect of conservative hydrophobic clusters for a family of related protein domains or just for a set of aligned proteins. ...

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Evalign . Evalign is a computerised evaluation method for protein sequence alignment algorithm. It compares computer alignments with structural alignments of protein sequences and tells how correct your sequence alignment program is. It gives additional information on the characteristics of different alignment algorithms and shows types specific failings in alignment. ... None . ... SAL Home | Other Scientific Fields | Chemistry, Biology Related . ... SAL@KachinaTech.COM . ...

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• SAL- Other Scientific Fields - Chemistry, Biology Related - SC_rate
• SAL- Other Scientific Fields - Chemistry, Biology Related - ClustalW
• SAL- Other Scientific Fields - Chemistry, Biology Related - GRS

... Algorithm & . Format requirements . ... SDPsite is a tool for identification of protein active and other functional sites, based on spatial clustering of SDPs (specificity-determining positions, described here ) with CPs (conserved positions). ... Mapping predictied positions onto structure and construction of the best cluster . ... The input data of the algorithm are a multiple protein alignment divided into specificity groups . ... is called statistical significance of the set of k* positions . ...

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• SDPpred
• SDPlight
• SDPsite

... GeneBee . ... A4 - Genebee Adaptive Automated Annotation . ... Annotation title . General options . ... DotHelix options . ... threshold (4 to 50) . ... DNA/RNA Dayhoff Johnson Blosum 30 Blosum 50 Blosum 62 Pam 60 Pam 120 Pam 250 Gonnet 120 Gonnet 250 Gonnet 350 . Supermotif's options . ... Maximum number . ... FT fragment picture options . Max number of FT . ... Other options . ...

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• Screening by similarity
• RNA secondary structure prediction
• AliComp - GeneBee Alignment Comparison Help

Estimation of translational importance of mammalian mRNA nucleotide sequence characteristics based on ribosomal profiling data O.A. Volkova1,*, Y.V. Kondrakhin2,3, R.N. Sharipov 1 2,3,4 Institute of Cytology and Genetics, SB RAS, Novosibirsk, Russia 2 Design ... Novosibirsk, Russia 4 Novosibirsk State University, Novosibirsk, Russia *ov@bionet.nsc.ru Keywords: ribosome profiling, RiboSeq, 5'UTR , mRNA , ... Until recent time there were no experimental data on the translation efficiency. ...

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• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/164.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/197.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/4.pdf

Mustela . On a taxonomic position of the weasel (Carnivora, Mustela ) from the Cheju Island (South Korea) . ... The weasel from Cheju Island (formerly в?' Quelpart Island), which is situated in Korean Strait south of the coast of South Korea, was described as a separate species Lutreola quelpartis Thomas, 1908. ... Abramov A.V. 2000b. The taxonomic status of the Japanese weasel, Mustela itatsi (Carnivora, Mustelidae) // Zoologicheskii Zhurnal. ... A Pictorial Guide to the Mammals of Japan. ...

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• Taxonomic position of Eptesicus bobrinskoi - abstract

... MPI_File_get_position . Returns the current position of the individual file pointer in etype units relative to the current view int MPI_File_get_position(MPI_File fh, MPI_Offset *offset) . ... All MPI routines in Fortran (except for MPI_WTIME and MPI_WTICK ) have an additional argument ierr at the end of the argument list. ierr is an integer and has the same meaning as the return value of the routine in C. In Fortran, MPI routines are subroutines, and are invoked with the call statement. ...

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• MPI_File_get_byte_offset | PARALLEL.RU - Информационно-аналитический центр по
• Pack and unpack | PARALLEL.RU - Информационно-аналитический центр по
• Derived datatypes | PARALLEL.RU - Информационно-аналитический центр по

... It interpolates the grid at the positions in the table and writes out the table with the interpolated values added as a new column. A bicubic [Default] or bilinear [ -Q ] interpolation is used, requiring boundary conditions at the limits of the region (see -L flag option). xyfile This is an ASCII [or binary, see -b ] file where the first 2 columns hold the (x,y) positions where the user wants to sample the 2-D data set. ... Default is 2 input columns]. -bo Selects binary output. ...

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• Space position
• AXAF-Chandra

... Полная версия этой страницы: MSc/PhD positions in the Optical Sensors for Bio- and Chemical Detection . Студенческий форум Физфака МГУ > Физфак и учеба > Аспирантура . ... Several MSc/PhD positions are now open for the qualified students who will be working in the area of optical fiber-based systems for bio- and chemical detection. These positions are supported for at least three years by the national strategic grant. ...

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• Студенческий форум Физфака МГУ > MSc/PhD positions in the Near-Field THz...
• MSc/PhD positions in the Near-Field THz Imaging - Студенческий форум Физфака...
• MSc/PhD positions in the Optical Sensors for Bio- and Chemical Detection -

Электронная библиотека Попечительского совета . ... Althaus E. - A branch-and-cut algorithm for multiple sequence alignment . ... Название: A branch-and-cut algorithm for multiple sequence alignment . Автор: Althaus E. Язык: . ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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• Moeller T.B. - Magnetic Resonance Imaging, Parameters and Positioning ::
• Attwood T.K., Parry-Smith D.J. - Introduction to bioinformatics :: Электронная
• Bilaniuk S. - A Problem Course in Mathematical Logic (vol. 2) :: Электронная

... Ярмарка вакансий и стажировок для студентов и выпускников вузов . ... University of Groningen, The Netherlands . PhD Position available . ... PhD Position in Theoretical Chemistry . ... She is considered to be one of top 5 universities in Europe for research in Materials Science, Chemistry, Space Science, Microbiology, and Environment/Ecology. ... In 1993, the MSCplus was accredited by the Royal Netherlands Academy of Arts and Sciences (KNAW) as a leading Research School in Materials Science. ...

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• A Ph.D. position, 2006, Finland / Вакансии / Physcareer.ru
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... Next: Additional commands Up: Client Previous: Oscilloscope Contents Index . Photo Diode command of the start button menu calls window that shows position of laser beam on the photodiode and intensity of this beam. If your monitor is near the microscope it can be convenient to adjust photodiode looking in Photo Diode program window. ... Photo Diode window sensitivity wouldn't fell down with low beam intensity. ...

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• Adjusting sample table Z-position
• Surface scanning

... Credit Copyright: Yuichi Takasaka / TWAN / www.blue-moon.ca Explanation: Recorded on April 15th, this total lunar eclipse sequence looks south down icy Waterton Lake from the Waterton Lakes National Park in Alberta, Canada, planet Earth. ... Around 270 BC, the Greek astronomer Aristarchus also measured the duration of lunar eclipses - though probably without the benefit of digital clocks and cameras. ... Publications with keywords: lunar eclipse - Aristarchus . ... The Moon Entering Earth s Shadow ....

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• Kalamalka Lake Eclipse
• Journal "Peremennye Zvezdy"
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Contents] [Prev page] [Next page] [Index] . ... Positioning HTML Content Using Styles . Positioning HTML Content Using the <LAYER> Tag . ... Absolute Positioning . ... Creating Positioned Blocks of Content Dynamically . Writing Content in Positioned Blocks . ... Positioning the Flower Layers . Positioning and Moving the Fish and Poles . Defining the onLoad Handler for the BODY Element . ... Adding Another Layer to Contain the Reverse Fish Image . ... The Initialization Functions . ...

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• Long description for example illustrating positioning with respect to a
• Long description for example illustrating absolute positioning
• Long description illustrating absolute positioning with respect to the initial

... The Laboratory of Bioorganic Chemistry and Molecular Imaging (LBCMI) at Swiss Institute of Technology, Lausanne (EPFL), Switzerland has an opening at the PhD level (http://lcbim.epfl.ch). ... The successful candidate should hold a master degree or equivalent in organic chemistry, chemical biology or other relevant discipline. ... The candidate should be open and interested in learning new techniques in biology and molecular imaging. ...

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• "Postdoctoral research position" - вакансия в разделе "Работа для химиков"
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• "Product development manager russia" - вакансия в разделе "Работа для химиков"

... Форумы > Аспирантура > Тема . ... PhD position in the University of Florida . PhD position is available in the department of Industrial and Systems Engineering, University of Florida. ... Risk Management and Financial Engineering Lab website: http://www.ise.ufl.edu/rmfe/ . ... Statistical estimation in terms of factor models can be tuned to risk preferences in order to achieve better performance when applied to portfolio optimization. ... University of Florida, November 2011. ...

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• MMOnline | Форумы | Аспирантура | PhD positions in logic and AI, Vancouver
• MMOnline | Форумы | Аспирантура | Phd positions at the Max-Planck Institute for
• MMOnline | Форумы | Аспирантура | PhD position at the University of Geneva,