... line source . ... 4 from repeat_joiner import Interval , RepeatJoiner . ... 7 for line in open ( sys . ... 8 line = line . ... 9 if line : . 10 c1 , c2 , from1 , to1 , from2 , to2 , ori1 , ori2 = line . ... 12 continue # first line . 13 ori1 = True if int ( ori1 ) == 1 else False . ... 15 from1 = int ( from1 ) . ... 17 from2 = int ( from2 ) . ... 20 r1 = Interval ( rj , c1 , from1 , to1 , ori1 ) . 21 r2 = Interval ( rj , c2 , from2 , to2 , ori2 ) . ... 32 for interval in interval_group : . ...

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• allpy: 387f692e2356 repeats/test.py
• allpy: 02c4cfd12d4c repeats/test.py
• allpy: ea137ba442e9 repeats/test.py

The files containing information about Affymetrix microarrays were downloaded from the official Affymetrix site. ... Probe sequences were mapped to the genome using Blat. ... The hits found "probe alignment regions" were . ... We annotated each probe alignment region using the mRNA and EST alignments provided by UCSC, considering only . ... The textual part of the interface consists of probe information section, probe alignment section and transcription state . ... Each gene and each probe alignment . ...

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... annotate . ... Automated merge with ssh://kodomo/petri_dish . ... Smirnova@1 . ... 2 def __init__ ( self , num , bacteria , radius , delta , bact_r , full_lifetime ): . ... 3 self . ... bacteria = bacteria . ... delta = delta . ... bact_r = bact_r . ... 10 def step ( self , delta_t , env ): . ... 11 for bact in self . bacteria : . ... 12 bact . lifetime -= delta_t . ... bacteria , delta_t , self . ... delta , self . bact_r , self . ... collision ( collide , delta_t , self . ...

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• petri_dish: petri.py annotate

A.N. Belozersky Institute . Bioinformatics Portal . ... Russian EMBnet Node . ... AliBee - Multiple alignment Release 2.0 . ... Grants information . ... Our Institute is a scientific department of Moscow State University. ... Address: Belozersky Institute,Moscow State University,Leninskie Gory 1,Bldg. ... Information about our activities and EMBnet resources around the World is available here . Information about our educational activities with kids, children and teenagers is available here . ...

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• Genebee Predicted Annotation
• Genebee Predicted Annotation - Advanced

Recovery and annotation of satellite DNA sequences from assembled and unassembled reads Aleksey Komissarov Institute of Cytology RAS, St. Petersburg, Russia , aleksey.komissarov@gmail.com Tandemly repeated DNA represents a significant portion of eukaryotic genomes. The large tandem repeats including satellite DNA are the main component of centromeric and pericentromeric regions that are mostly unassembled. ...

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• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/128.pdf
• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/164.pdf

Электронная библиотека Попечительского совета . ... Wynn P. - Converging factors for continued fractions . ... Название: Converging factors for continued fractions . Автор: Wynn P. Язык: . ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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• Rockett A.M., Szusz P. - Continued Fractions :: Электронная библиотека
• Pevzner P.A. - Computational Molecular Biology An Algorithmic Approach ::
• Khinchin A.Y. - Continued Fractions :: Электронная библиотека попечительского

Given word length and max number of mismatches . Use MEME algorithm for define conserved blocks . Apply the Dynamic programming algorithm to create chain of the blocks . Refine the chain using combined profile for chain of blocks. ... Reduce word length and number of mismatches and repeat the procedure for spacer between the blocks. ... Create helix profile and apply MEME-like iterative procedure to find sets of helices that consistent lokated reative to conserved blocks . ...

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. The work is supported by the Russian Foundation for Basic Research, grant 10-07-00685-a . PDB . Classification . Domain instances . Bonded with NA . 1AIS . TRANSCRIPTION/DNA . 2 . 1 . 1C9B . TRANSCRIPTION/DNA . 10 . 10 . 1D3U . GENE REGULATION/DNA . 2 . 2 . 1VOL . TRANSCRIPTION/DNA . 2 . 2 . total (4 entries) . 16 . 15 . No comments on this family . Send your questions and comments to sas@belozersky.msu.ru .

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• SCOP famyli: Rel/Dorsal transcription factors, DNA-binding domain
• SDP home page

Key-words: rhythm, stress, syllable, rhythmic structure, syntagm, utterance, prosody, speech production, speech perception . ... In speech communication, RS are both units of speech production and speech perception. ... The research of speech rhythm in diachrony and synchrony consists of the analysis and the description of speech rhythmic units concerning Old Church Slavonic, Old Russian, Old High German in diachrony and Modern Russian, German, Czech and Bulgarian in synchrony. ...

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. A program for alignment of structures of DNA-protein complexes . Home . Feedback . Help . About . Input PDB code of the first complex: and chain of the protein (optional): . Input PDB code of the second complex: and chain of the protein (optional): . If you get stuck with program input, try example data and click Align! Example data . 2016

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• Nhunt: program for nucleic acid sequence similarity search
• ConClus

... Improvement of Java type compiler using in language independent remote process calls in KBase project. 09/2011 ­ present: Moscow State University, Dept. of Bioengineering and Bioinformatics (Russia) Scientific Research Java developer and lecturer Enhanced the CAMPS web resource (http://webclu.bio.wzw.tum.de/CAMPS2.0/) that enables multiple classification of transmembrane proteins. ... Developed web based UI for visualization of a graph of transmembrane protein families. ... Sutormin RA, Mironov AA. ...

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• http://storage.bioinf.fbb.msu.ru/~roman/Sutormin_CV_aug2014.pdf
• http://storage.bioinf.fbb.msu.ru/~mazin/laci.fasta

Rainbow Airglow over the Azores . ... Airglow . Now air glows all of the time, but it is usually hard to see. ... The long-duration exposure nearly along the vertical walls of airglow likely made the undulating structure particularly visible. ... A spectacular sky is visible through this banded airglow, with the central band of our Milky Way Galaxy running up the image center, and M31, the Andromeda Galaxy , visible near the top left. ... NASA Web Site Statements, Warnings, and Disclaimers . ...

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• Rainbow Airglow over the Azores
• The Annotated Galactic Center
• Астронет > An Annotated Leonid

... 2016 March 22 . Rainbow Airglow over the Azores . ... Explanation: Why would the sky glow like a giant repeating rainbow? ... The long-duration exposure nearly along the vertical walls of airglow likely made the undulating structure particularly visible. ... A spectacular sky is visible through this banded airglow, with the central band of our Milky Way Galaxy running up the image center, and M31, the Andromeda Galaxy , visible near the top left. Explore Your Universe: Random APOD Generator . ...

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• APOD: September 11, 1999 - The Annotated Galactic Center
• APOD: 2010 August 31 - The Annotated Galactic Center
• APOD: 2001 November 11 - An Annotated Leonid

The seminar is supported by the grant of Federal Programm "Integration" . annotation of talk . A.V. Kuznetsov (IKI) . The Catalog of the GRB Sources . The catalog of the GRB sources is composed on the base of BATSE data up to 01.08.99. This catalog includes about 90 candidates determined by the GRB ckusters. ... The tables with basic data of the GRB clusters and the sources are pesented. ... Practically the present work is an attempt of the GRB source catalog creation. ...

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• Talk at ASA
• AXAF-Chandra
• The X-ray Optics

... Next . 3.0.12 - 3.0.18 only, PHP 4 >= 4.0.0) cpdf_add_annotation -- Adds annotation . void cpdf_add_annotation ( int pdf document, float llx, float lly, float urx, float ury, string title, string content [, int mode]) . The cpdf_add_annotation() adds a note with the lower left corner at ( llx , lly ) and the upper right corner at ( urx , ury ). The optional parameter mode determines the unit length. If it's 0 or omitted the default unit as specified for the page is used. ...

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• continue
• Java Distributed Computing course annotation
• pdf_add_annotation

International Laser Center of MSU . ... Education . ... Laser Graduate School . ... Home Education Continuing Education and Retraining Program . The International Laser Center of Moscow State University accepts visiting scholars from all over the world for training programs in laser physics and technologies. The ILC offers the following continuing education and retraining programs in these fields: . ... International Retraining and Post-docs Program; . Laser Graduate School short courses . ...

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• ILC MSU

Download Russian Journal of Biological Invasions, 2010, issue ? ... In the third issue of the Russian Journal of Biological Invasions, 2010, seven articles are presented, in which the questions on invasions and distribution of alien species in the regions of Ukraine and Russia are considered. ... Web-site of Russian Journal of Biological Invasions is developed and supported by the . Group of Bioinformatics and Modeling Biological Processes" IPEE RAS . ... Russian Journal of Biological Invasions . ...

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• Russian journal of biological invasions: Site map
• Russian journal of biological invasions: Contents
• Экологический Форум - Фундаментальная Экология: the domestic continued

SCIENTIFIC TASKS AND RESULTS . In the results of searching for new perspective solid state materials for the quantum electronics, non-linear optics and other fields of physics more than 200 various oxide compounds were synthesized and peculiarities of their atomic structure and physical properties are studied. Single crystals of 80 such the compounds are grown and thoroughly investigated. ... A family of oxide-ion conductors on the base of La 2 Mo 2 O 9 (30.10.09) . ... Main page ...

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To continue a command onto another line enter a ' \\ ' (backspace) character and then press <Return> . You can then continue entering the command. For example: rcp ubik:/home/roger/recipe.ps .; Return> lpr -Pps3 #6m recipe.ps . This copies the file recipe.ps from the home directory of the user roger on the remote host ubik to the users current directory. ... If you are using the Bourne, BASH or Korn shell a > character appears as a prompt at the start of the second command line. ...

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• The break and continue statements
• Example of using the break and continue statements
• Save and continue editing

. Home . 09 / 04 / 2016 . QFTHEP . Home . News . Bulletins . Programme . QFTHEP Poster . Sponsors . Proceedings . Archive . QFTHEP'2013 . QFTHEP'2011 . QFTHEP'2010 . QFTHEP'2004 . QFTHEP'2003 . QFTHEP'2001 . QFTHEP'2000 . QFTHEP'1999 . QFTHEP'1997 . User Menu . Login/Logout . QFTHEP'2015 .

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• QFTHEP'2011
• QFTHEP'2013
• QFTHEP'2010