... file . ... annotate . file log . ... Bug: alignment IO recorded incorrect value to sequence's source attribute -- fixed . ... dendik@624 . ... 3 * new : Alignments , Sequences and Blocks now can have Markups , see the wiki . ... 4 * new : File format 'markup' for storing alignment with arbitrary markups . ... 5 * new : processor allpy . ... 6 * new : method allpy . base . ... 10 * new : javascript viewer colors columns by conservedness . ... dendik@602 . ... 14 * new : started NEWS file . ...

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• allpy: test/test.py annotate
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... 5 def __init__ ( self , position , velocity , lifetime , mutated ): . ... 11 def check_collision ( self , bacteria , delta , bact_r ): . ... 33 def asexual ( self , bacteria , delta_t , radius , delta , bact_r , full_lifetime ): . ... 38 def sexual ( self , other , bacteria , delta_t , radius , delta , bact_r , full_lifetime ): . ... 41 def find_place_a ( self , bacteria , delta , bact_r ): #searches for place for children . ... 48 def find_place_s ( self , other , bacteria , delta , bact_r ): . ...

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Электронная библиотека Попечительского совета . ... Althaus E. - A branch-and-cut algorithm for multiple sequence alignment . ... Название: A branch-and-cut algorithm for multiple sequence alignment . Автор: Althaus E. Язык: . ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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... Criteria of branch quality . As it was repeatedly told , phylogenetic trees consist from branches. ... I. e., those positions, which can separate sequences of the branch from other sequences in the alignment. ... Measure of branch separation . ... Here and further: A - branch of the tree, i , j - sequences of alignment . ... That's why number of conserved positions in some branch should be considered in complex with the distribution of conserved positions in the whole alignment. ...

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• About this project
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A.N. Belozersky Institute . Bioinformatics Portal . ... Russian EMBnet Node . ... AliBee - Multiple alignment Release 2.0 . ... Grants information . ... Our Institute is a scientific department of Moscow State University. ... Address: Belozersky Institute,Moscow State University,Leninskie Gory 1,Bldg. ... Information about our activities and EMBnet resources around the World is available here . Information about our educational activities with kids, children and teenagers is available here . ...

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• Genebee Predicted Annotation
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The files containing information about Affymetrix microarrays were downloaded from the official Affymetrix site. ... Probe sequences were mapped to the genome using Blat. ... The hits found "probe alignment regions" were . ... We annotated each probe alignment region using the mRNA and EST alignments provided by UCSC, considering only . ... The textual part of the interface consists of probe information section, probe alignment section and transcription state . ... Each gene and each probe alignment . ...

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• SVETKA, a program for multiple sequence alignments analysis
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NGS Data Analysis with Unipro UGENE Olga Golosova, Yuriy Vaskin, German Grekhov, Yuliya Algaer UNIPRO, Lavrentieva ave. ... That is where Unipro UGENE NGS framework comes in play. ... Moreover, the UGENE toolkit allows one to automate common tasks by creating workflows with the integrated tools using the UGENE Workflow Designer. Analysis of NGS data with UGENE may start, for example, from quality control of raw NGS data, received from a sequencing facility, with the integrated FastQC [3] tool. ...

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• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/27.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/237.pdf
• http://mccmb.belozersky.msu.ru/2013/abstracts/abstracts/215.pdf

... Программа повышения квалификации ?Исследование природы вместе с детьми? ... День леса - 2013 . ... Содержание сборника, 2004 . ... из сборника Вместе со всей планетой , Пущино 1995 . ... Загадки и тайны мира природы очень интересны детям, даже самым маленьким. ... В 1995 г. мы вместе с учеными подмосковного города Пущино помогали школьникам выступить в роли экологических наставников для малышей . Заметка об этой работе была опубликована в журнале ЮНЕСКО Connect . ...

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... Query: E. coli K12 tRNA (valV, selC, asnV, leuT, argZ from EMBL entry U00096 ) . ... BLASTN (both) | ... Nhunt . ... BLASTN (optimal): 3.5 s . BLASTN (default): 0.8 s . ... Nhunt: 7 s The program Nhunt surpass all other tested programs in sensitivity. ... Nhunt BLASTN (optimal): 2.9 s . ... Nhunt: 3.7 s BLASTN with default parameters actually cannot find any significant homologues. ... Nhunt-3: 1.7 s BLASTN with default parameters actually cann't find any significant homologues. ...

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• ConClus
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The Isaac Newton Institute (Instituto Isaac Newton) for astronomical research (INI) was founded in 1978 by Gonzalo Alcaino. The main office is located in the eastern outskirts of Santiago (Chile). ... The Moscow branch was the first one established outside Chile. ... Besides the above named branches, the Chilean staff of the Isaac Newton Institute is involved in collaboration with astronomers of the Observatory of Rome in several research projects using data secured from telescopes in Chile. ...

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SAI 175 anniversary . ... Moscow University . Search for in SAI Moscow University Search for in Russian astronomical resources . ... SAI Astronomical Databases . ... Browse SAI Software archive(ftp.sai.msu.su) . ASTRONET.RU - Russian Astronomical Network (available in translit also) . ... SAI Supernovae Research Group . ... Department of the Galaxy and Variable Stars (in Russian) . Sternberg Astronomical Institute Seminars . ... All-Russian Astronomical Olympiad (in Russian) . ...

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• SAL- Other Scientific Fields - Chemistry, Biology Related - RnaViz
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• SAL- Other Scientific Fields - Chemistry, Biology Related - PomBase

PHP Manual . ... PHP 4 >= 4.0.0) domxml_children -- Returns children of a node or document . array domxml_children ( object doc|node) . ... This function is EXPERIMENTAL . ... In the following example the variable children will contain an array with one node of type XML_ELEMENT. ... php $doc = new_xmldoc("1.0"); $root = $doc->add_root("HTML"); $head = $root->new_child("HEAD", ""); $head->new_child("TITLE", "Hier der Titel"); $head->set_attribute("Language", "ge"); $children = $head->children(); ?> ...

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. Участники . Исследования . Телеконференция . English Version | Сотрудники Центра | Партнерство . Оформление сайта . Сохраним природу . Учительская . Обучение . Олимпиада "Ломоносов" . Международное сотрудничество . Сайт поддерживается: . Институтом экологического почвоведения МГУ . Фондом исследования аграрного развития . webmaster@mail .

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• The Ecological Cooperation project is the first large scale childrenтАЩs
• Children's ecological telecommunication project

Given word length and max number of mismatches . Use MEME algorithm for define conserved blocks . Apply the Dynamic programming algorithm to create chain of the blocks . Refine the chain using combined profile for chain of blocks. ... Reduce word length and number of mismatches and repeat the procedure for spacer between the blocks. ... Create helix profile and apply MEME-like iterative procedure to find sets of helices that consistent lokated reative to conserved blocks . ...

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• Input Formats
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... News . ... 32-bit Microcontroller Programming . Microcontroller Control of Motors . Second-year students classes . ... Parallel Programming . ... Microcontroller Programming . ... Microcontroller-related . ... Serguey Elizarov . Serguey Zapunidi . ... Alexander Karabutov . ... Serguey Yakovlev . ... We sincerely wish you a Happy New Year and Merry Christmas! We hope that this year has been for you a year of new achievements. ... Happy New Year 2016! ... Hits . ... Written by Pavel . ...

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... Forty days and forty nights, didn't it rain, children? ... Elementary, my dear, two time two is four. Elementary, my dear, two time three is six. Elementary, my dear, two time four is eight. Elementary, my dear, two time five is ten. ... Elementary, my dear, two time six is twelve. Elementary, my dear, two time seven is fourteen. ... Two times ten is twenty; eleven twice is twenty-two. ... Two times 174 equals two times 100 plus two times 70 plus . ... minus two times two. ...

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... Previous message: [Comphep-common] Re: $COMPHEP/genEvents . Next message: [Comphep-common] Re: a bug in comphep b76i (windows version) . Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] . Dear COMPHEP experts, Is it possible to evaluate width and branching ratios for a 1->2 process (for example ~1+ -> 2*x) in batch mode? ... More information about the Comphep-common mailing list . ...

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... Geography of World Economy . ... Recreational Geography and International Tourism . ... Physical Geography and Landscape Science . ... About Faculty . ... Research laboratories . ... Type of field courses . ... Specialists of the same profile graduate from the branches of the Faculty, located in Sevastopol (Ukraine) and Astana (Kazakhstan). ... International programme in Natural Resource Management and Law offers a unique combination of Natural and Environmental Sciences and Science of Law. ...

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List of Publications . ... Palyulin V.V., Potemkin I.I. Article " Microphase Separation in Melts of Double Comb Copolymers ", Polymer Science, Ser. ... Palyulin V.V., Potemkin I.I., Microphase separation of double-grafted copolymers (centipedes) with gradient, random and regular sequence of the branch points , Journal of Chemical Physics, 2007 , 127, 124903. ( download ) . ... Palyulin V.V., Potemkin I.I., "Microphase separation in double comb copolymer melts , . ... Palyulin V.V., Potemkin I.I., " . ...

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... 1 Концепция политики разработки дистрибутивов ALT Linux . ... Бранч ? ... Предлагается осуществлять следующую политику сопровождения бранча и создания дистрибутивов в ALT Linux: . Бранч для разработки "development branch" создается путем копирования Sisyphus в определенное время (в сентябре и марте), полгода идет к стабилизации. ... В это самое время мейнтернеры могут самостоятельно размещать в бранч для разработки свои новые и исправленные пакеты, также не забывая размещать их и в Sisyphus. ...

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