... Accepted input types are: A sequence in FASTA format begins with a single-line description, followed by lines of sequence data. ... Sequences are expected to be represented in the standard IUB/IUPAC amino acid and nucleic acid codes, with these exceptions: lower-case letters are accepted and are mapped into upper-case; a single hyphen or dash can be used to represent a gap of indeterminate length; and in amino acid sequences, U and * are acceptable letters (see below). ...

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• FASTA format description

The files containing information about Affymetrix microarrays were downloaded from the official Affymetrix site. ... Probe sequences were mapped to the genome using Blat. ... The hits found "probe alignment regions" were . ... We annotated each probe alignment region using the mRNA and EST alignments provided by UCSC, considering only . ... The textual part of the interface consists of probe information section, probe alignment section and transcription state . ... Each gene and each probe alignment . ...

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Each row in the Particles Table describes a particle - anti-particle pair. ... 2*Spin for a doubled particle spin: 0 for scalar, 1 for spinor and 2 for vector particles. ... In this case the anti-particle "A+" is transformed by conjugated representation. ... Aux for an auxiliary field which allows to modify particle propagators. ... spin 0 case: . ... Zero mass vector particle must be marked as a gauge one using the Aux field (see below). ... is permitted for vector ( 2*spin=2 ) particle. ...

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... pdb: allow multiple chains per sequence (documentation only) . ... 12 import allpy_data . ... 14 class Project ( object ): . ... 19 * alignment -- dict . ... 27 def __init__ ( self , * args ): . ... 31 Project(sequences, alignment) -> new Project with sequences and . ... 33 Project(fasta_file) -> new Project, read alignment and sequences . ... sequences , self . ... 97 >>> sequences,alignment=project.Project.from_fasta(open("test.fasta")) . ... 133 alignment [ sequences [ - 1 ]] = alignment_list . ...

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• allpy: 69079d72d207 allpy/fileio.py
• allpy: 61de9b5744c8 allpy/fileio.py
• allpy: 6e93a74d1917 allpy/fileio.py

... Plugin Installation Instructions . ... WikiRing Consultants This plugin will help you to write readable markup (TWikiMarkup, HMTL, ...) within TWiki by allowing tags and arguments to be formatted on multiple lines. ... Basically, there are two ways of glueing and recombining lines by either removing all whitespaces between two lines using %*~~ or by removing all whitespaces and separateing lines with a single space using %~~~ . ... lib/TWiki/Plugins/GluePlugin.pm . ... TWiki:Plugins/GluePlugin . ...

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• GluePlugin - TWiki - TWiki - (printable)

Modules | ... Apache HTTP Server Version 2.0 . Apache > HTTP Server > Documentation > Version 2.0 > Modules . ... Allows "anonymous" user access to authenticated areas . ... This module does access control in a manner similar to anonymous-ftp sites; i.e. have a 'magic' user id 'anonymous' and the email address as a password. ... When set On the 'password' entered is checked for at least one '@' and a '.' to encourage users to enter valid email addresses (see the above Anonymous_LogEmail ). ...

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• mod_setenvif - Apache HTTP Server
• MySQL Reference Manual for version 3.23.10-alpha. - H Description of MySQL
• mod_access - Apache HTTP Server

Modules | ... Apache HTTP Server Version 2.0 . Apache > HTTP Server > Documentation > Version 2.0 > Modules . ... Allows "anonymous" user access to authenticated areas . ... This module does access control in a manner similar to anonymous-ftp sites; i.e. have a 'magic' user id 'anonymous' and the email address as a password. ... When set On the 'password' entered is checked for at least one '@' and a '.' to encourage users to enter valid email addresses (see the above Anonymous_LogEmail ). ...

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• mod_setenvif - Apache HTTP Server
• mod_charset_lite - Apache HTTP Server
• COUPPCD

... 3.0.12 - 3.0.18 only, PHP 4 >= 4.0.0) imap_search -- This function returns an array of messages matching the given search criteria . array imap_search ( int imap_stream, string criteria, int flags) . ... ANSWERED - match messages with the \\ANSWERED flag set . ... BEFORE "date" - match messages with Date: before "date" . ... FLAGGED - match messages with the \\FLAGGED (sometimes referred to as Important or Urgent) flag set . ... RECENT - match messages with the \\RECENT flag set . ...

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• ImageAlphaBlending
• set_time_limit
• imap_get_quota

... x264 is an open source codec of standard MPEG4 AVC/H.264, developed by programmers from all over the world. ... Accumulated during previous frames' compressions statistic is actively used by codec to improve effectiveness of adaptive models. ... These parameters are used only before encoding start, so, our improvements are more significant for short sequences. ... 3 Results of codec x264 modification on "flower" sequence . ... 5 Results of codec x264 modification on "flower" sequence, low bitrates ....

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• Road monitoring | Graphics and Media Lab
• Road monitoring | Лаборатория компьютерной графики и мультимедиа
• x264 codec improvement | Лаборатория компьютерной графики и мультимедиа

... Parsimony method . ... It is based on the following principle: the ancestral sequences (posed in nodes of a phylogenetic tree) should be such that the minimal required number of character replacements on the branches of the tree is less than for any other choice of sequences. ... If the preliminary character of the node is * , but the output character of its immediate ancestor is some letter (say, X ), and its set of possible characters contains X , then the output character of the node is also X . ...

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• Inquiry information || Rule of four sequences
• Inquiry information || Distances

... Gambini R. - Relational description of the measurement process in quantum field theory . ... Название: Relational description of the measurement process in quantum field theory . ... Besides the obvious difficulty of dealing with the infinite degrees of freedom of the field theory, one has to analyse the restrictions imposed by causality concerning the allowed operations in a measurement process. ... Электронная библиотека попечительского совета мехмата МГУ , 2004-2016 . ...

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• Berman D.H. - The fluctuation-dissipation theorem for contracted descriptions
• Поиск книг, содержащих angular momentum, allowed orientations :: Электронная
• Поиск книг, содержащих bosons boundaries, allowed bands :: Электронная

... An acronym of 3 or more letters will be automatically linked only if a topic of that name already exists in the Web . ... Explanation why editing and saving a topic does not always increase the revision . ... A list of frequently asked questions about the use of Foswiki . ... Macro . ... Macros . ... Documentation for webmasters, system administrators, project managers, team leaders, and all other users of Foswiki . ... This topic: System > WebHome > ReferenceManual > UserDocumentationCategory . ...

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• (backlinks in all Webs) WikiGroups < Main < Foswiki
• (backlinks in Main Web) WikiGroups < Main < Foswiki
• VarENCODE < System < Foswiki

... [InterwikiPlugin]] : This plugin links =ExternalSite:Page= text to external sites based on aliases defined in the [[InterWikis]] topic $ [[LoginName]] : Explanation of the term login name $ [[ Macros ]] : An explanation of the term Macro and a list of most the Macros defined on this Foswiki $ [[MacrosQuickStart]] : Short introduction to Macros $ [[MainFeatures]] : A brief list of the main features of ... This topic: System > WebHome > ReferenceManual > UserDocumentationCategory . ...

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• (backlinks in all Webs) WikiGroups < Main < Foswiki
• (backlinks in Main Web) WikiGroups < Main < Foswiki
• VarENCODE < System < Foswiki

... public class ExtensionFileFilter . ... A convenience implementation of FileFilter that filters out all files except for those type extensions that it knows about. ... Extension - create a new filter that filerts out all files but gif and jpg image files: JFileChooser chooser = new JFileChooser(); ExtensionFileFilter filter = new ExtensionFileFilter( new String{"gif", "jpg"}, "JPEG GIF Images") chooser.addChoosableFileFilter(filter); chooser.showOpenDialog(this); . ... private java.lang.String . ...

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fitshdr_edit - FITS-file headers interactive editor fitshdr_edit [options] FITSfile_name . fitshdr_edit utility allows to modify FITS headers' lines interactively (FITS MultiExtentionsFiles included). fitshdr_edit is just simple shell script around fitshdr utility. ... It means, that You can't remove line from header! ... 560:CRDELT2 = 21.0 / this is example 640: 720:HISTORY header No.0: 1st history line 123456789012345678901234567 880:COMMENT Sat Sep 25 21:17:34 CEST 2004 / by fitshdr_edit . ...

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• Manpage of FITSHDR_EXPAND
• Manpage of FITSHDR

Brain Research Group >> Research >> Change-point analysis ... << previous next >> . ... When detection of the change-points in alpha band power was performed as in the previous subsection, more than one change-point per second was obtained in average. ... The hypothesis of the hierarchy of EEG segmental descriptions (Kaplan 1998) (see subsection 7.3.2) is a theoretical reason for introducing the adjustment of the change-point detection probability. ...

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The QKeyEvent class contains parameters that describe a key event. ... QKeyEvent  ( int type, int key, int ascii, int state )  . ... void  accept  ()  . ... Key events occur when a key is pressed or released when a widget has keyboard input focus. A key event contains a special accept flag which tells whether the receiver wants the key. ... Constructs a key event object. ... Sets the accept flag of the key event object. ... Clears the accept flag parameter of the key event object. ...

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• Qt Toolkit - QImageFormatType Class
• Qt Toolkit - QIntCache Class
• Qt Toolkit - QCursor Class

... The standard IUPAC one-letter codes for the amino acids are used. ... Ambiguities are indicated by listing the acceptable amino acids for a given position, between square brackets `[ ]'. ... If your pattern consists of one-letter amino acid codes only, without any ambiguous residues, you need not specify the '-', i.e. you can directly copy/paste peptide sequences into the text field. ... To search all sequences which do not contain a certain amino acid, e.g Cys, you can use <{C}*>. ...

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• Custom Query ? Cyclyc Cell Automata

Soliton-antisoliton production in par ticle collisions Sergei Demidov, Dmitry Levkov Institute for Nuclear Research RAS levkov@ms2.inr.ac.ru September 10, 2010 S. Demidov, D. Levkov (INR RAS) Soliton-antisoliton production September 10, 2010 1 / 15 Introduction Topological solitons (1 + 1) V() 1 S= 2 g dxdt (µ )2 /2 - V () =c=1 g -- semiclassical parameter and coupling constant ( = g ) v0 v+ S v+ 0 A x vS. ... S. Demidov, D. Levkov (INR RAS) Soliton-antisoliton production September 10, 2010 15 / 15 ...

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• http://qfthep.sinp.msu.ru/talks/kinks.pdf

... 1920- . ... 1921 . ... 1925 . ... 1928 . ... 1928­1929 . 1929 . ... 1930 . ... 1933 . ... 1937 . ... 1920 1921 . ... 1929 , 1931 . ... 1934­1936 . 1932­1933. ... 28.09.1925­17.09.1926. ... 1925­1928. ... 1929­1930 . ... 1935) « » « » ( 1937). ... 1928­1970. ... 1930­1940. ... 1931­1934 .: ... 8 ­ () 1934. ... 1933­1934. ... 1934­1937. ... 1937­1962. ... 1968­1970. ... 1965­1970, 79 . ... 1925­1962 . ... 1970­1978. ... 1966­ 1970. ... 1920- 1960- . ... 1930­1970. ... 1970­1976. ... 1970. ...

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