... Parsimony method . ... It is based on the following principle: the ancestral sequences (posed in nodes of a phylogenetic tree) should be such that the minimal required number of character replacements on the branches of the tree is less than for any other choice of sequences. ... If the preliminary character of the node is * , but the output character of its immediate ancestor is some letter (say, X ), and its set of possible characters contains X , then the output character of the node is also X . ...

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... Re: may someone tell me how to write the following sentences in russia [ re: CAnEP ] . ... Re: may someone tell me how to write the following sentences in russia [ re: nu3geTC ] . ... Re: may someone tell me how to write the following sentences in russia [ re: DizzyDen ] . ... Re: may someone tell me how to write the following sentences in russia [ re: Spring ] . ...

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... Each day a different image or photograph of our fascinating universe is featured, along with a brief explanation written by a professional astronomer. October 21, 1999 . Follow The Spots . Credit: Louis Strous ( LMSAL ), SOHO - MDI Consortium, ESA , NASA . ... Just follow the sunspots . ... It shows the Sun's visible surface for most days of August 1999 so that the same sunspots appear many times as the solar rotation carries them across the face of the Sun . ... About APOD > . ...

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• Astronomy Picture of the Day's Educational Links
• APOD: June 1, 1998 - Solar Flares Cause Sun Quakes
• APOD: 2015 January 5 - A Fox Fur, a Unicorn, and a Christmas Tree

... Derived datatypes . Up: Point-to-Point Communication Next: Datatype constructors Previous: Null processes . ... Instead, MPI provides mechanisms to specify more general, mixed, and noncontiguous communication buffers. ... More general communication buffers are specified by replacing the basic datatypes that have been used so far with derived datatypes that are constructed from basic datatypes using the constructors described in this section. ... A sequence of basic datatypes . ... Центры . ...

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• Data conversion | PARALLEL.RU - Информационно-аналитический центр по
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• Heterogeneous networks of multicomputers and the ch_nexus device | PARALLEL.RU

... You can create a forced internal link by enclosing words in double square brackets, i.e. write [[text formatting FAQ]] to get text formatting FAQ that links to topic TextFormattingFAQ . ... Words get bold by enclosing them in * asterisks . Words get italic by enclosing them in _ underscores . Words get bold italic by enclosing them in __ double-underscores . Words get shown in fixed font by enclosing them in = equal signs . ... Note for bold , italic , bold italic and fixed font text: . ...

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• %TOPICTITLE% (6 vs. 10) - TWiki
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• RegularExpression - TWiki - TWiki

The first character in each record (line) of formatted output defines a carriage control character to the lineprinter, often called ASA-character, for a previous name of the US Standardization Organization ANSI. ... When using VAX/VMS for output first on a file, which is to be printed later on paper, it is advisable to use the extension .DAT . ... You use the compiler switch -vms f77 -vms prog.f and get the control characters removed from the screen output. ...

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• Specifications
• Media types
• Format

IMPALA: Integrating Matrix Profiles And Local Alignments 1. ... Primary preprocessing Prepare the following files : i. a collection of PSI-BLAST-generated profiles with arbitrary names and suffix .chk; ii. a collection of profile master sequences , associated with the profiles , each in a separate file with arbitrary name and a 3 character suffix starting with c; the sequences can have deflines; they need not be sequences in nr or in any other sequence ...

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• http://kodomo.cmm.msu.su/trac/tanchiki/wiki/CamelCase?format=txt
• http://kodomo.cmm.msu.su/trac/tanchiki/wiki/WikiPageNames?format=txt
• http://kodomo.cmm.msu.su/trac/tanchiki/wiki/CamelCase?version=1&format=txt

... Alternative core new atoms (%) . ... An alignment of a set of structures is a set of positions , to each position some atoms from different structures correspond. ... Geometrical core of a set of structures is a subset of alignment positions those atoms are disposed similarly in all structures. ... For any two positions included into geometrical core, the distances between CA atoms of those positions in all structures may differ not more than the value of the parameter "Distance spreading". ...

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. Options modify the way that a command works. They usually consist of a hyphen followed by a single letter. For example the wc command counts the number of words, characters and lines in a file. By using a different option you can choose what is counted. wc -w file1 counts the words wc -c file1 counts the characters wc -l file1 counts the lines . Using multiple options .

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• rtftohtml Users Guide - 7 Nested Lists
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• Character Entity Set(s)

... Algorithm & . Format requirements . ... SDPsite is a tool for identification of protein active and other functional sites, based on spatial clustering of SDPs (specificity-determining positions, described here ) with CPs (conserved positions). ... Mapping predictied positions onto structure and construction of the best cluster . ... The input data of the algorithm are a multiple protein alignment divided into specificity groups . ... is called statistical significance of the set of k* positions . ...

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• SDPlight
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Brain Research Group >> Research >> Change-point analysis ... << previous next >> . ... Unless in many other approaches to the analysis of different signal coupling, the information entering the analysis of synchronization in our approach is explicitly represented in the form of elementary, instantaneous events (the change-points). ... Hence the use of correlation/coherency estimates in parallel with change-point analysis seems to be quite rational. ...

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• Change-points in EEG components with different pattern
• Change-points at different levels of the hierarchy of EEG segmental...

previous next contents elements attributes . ... Changes to elements . New elements . ... The new elements in this version of HTML are Q , INS , DEL , ACRONYM , LEGEND , COLGROUP , BUTTON , and FIELDSET . ... These changes were additionally motivated by the desire to avoid future problems if this specification is extended to allow frame and rules attributes with other table elements. ... To solve these problems this specification introduces several new attributes and elements. ...

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• Basic HTML data types
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• MySQL Reference Manual for version 3.23.10-alpha. - H Description of MySQL

... Accepted input types are: A sequence in FASTA format begins with a single-line description, followed by lines of sequence data. ... Sequences are expected to be represented in the standard IUB/IUPAC amino acid and nucleic acid codes, with these exceptions: lower-case letters are accepted and are mapped into upper-case; a single hyphen or dash can be used to represent a gap of indeterminate length; and in amino acid sequences, U and * are acceptable letters (see below). ...

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• GeneBee BLAST 2.2.22+ Services Help
• AliComp - GeneBee Alignment Comparison Help
• RNA secondary structure prediction

... USING MLTNET MLTNET operates in two modes: 1. ... Or, he may be using a remote host which requires both upper and lower case characters from a local terminal which has only upper case; in such a case he would want MLTNET to transmit upper and lower case as appropriate. ... Currently MLTNET recognizes the following characters as commands to it: Q: (quit) Causes MLTNET to switch from remote mode to local mode. (local echo) Causes MLTNET to echo characters as it transmits them to the remote site. ...

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• http://mirror.msu.net/pub/rfc-editor/rfc-ed-all/rfc339.txt
• http://mirror.msu.net/pub/rfc-editor/rfc-ed-all/ien/ien180.txt
• http://mirror.msu.net/pub/rfc-editor/rfc-ed-all/rfc135.txt

... There are many methods for reconstruction of phylogeny from multiple protein sequence alignments. ... In this work we tried to create expert systems that predict: 1) if the data is good for phylogeny reconstruction by Fitch ­ Margolish (FM) method; 2) which method would work better: FM or UPGMA. ... We used two species sets, first containing 27 Fungi species and second containing 25 Metazoa species. ... From the entire set of alignments, two subsets were extracted, called "good" and "bad". ...

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• http://mccmb.belozersky.msu.ru/2015/proceedings/abstracts/33.pdf
• OMICS Startup Contest

... K. Krylov . There was undertaken a research of lengthes of marinon - some integral units obtained by segmenting of comleted (whole) fiction prosaic texts (stories, small novels, novels). ... Overall corpus of considereded texts (Russian fiction prosaic) contain more than two million of graphic running words. Undertaken research has lead us to revealing of three main regularities. 1) to formulation of the law of optimum relation between number of elements within each submicroscopic level; . ...

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• Khmelev D.V.- Disputed Authorship Resolution Using Relative Empirical Entropy
• MSU-LGCLL:: DicTUM-1 - A System for Dictionary-Text Universal Manipulations and

Shell models in rapidly rotating dynamo systems" . ... We consider the main features of the spectra for various intensities of heat sources in the existing spherical models of convection and geodynamo and propose a simple shell model which can mimic some properties of the original dynamo system. ... M. Reshetnyak - United Institute of Physics of the Earth, Russian Academy of Scienc, 123995, Moscow, Russian Federation; e-mail: reshetnyak@ifz.ru ; . ...

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... A string is series of characters. ... The easiest way to specify a simple string is to enclose it in single quotes (the character ' ). ... Note: Unlike the two other syntaxes, variables will not be expanded when they occur in single quoted strings. echo 'this is a simple string'; echo 'You can also have embedded newlines in strings, like this way.'; echo 'Arnold once said: "I\'ll be back"'; // output: .. ... php $str = <<<EOD Example of string spanning multiple lines using heredoc syntax. ...

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• switch
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• smbpasswd (5)

Next: The Stopping Radius in Up: ``Ecology'' of Magnetic Rotators Previous: The Environment of the . Now we consider qualitatively the effect of the electromagnetic field of a magnetic rotator on the accreting plasma. ... What is important is that both relativistic particles and magnetic dipole radiation will transfer their momentum and hence exert pressure on the accreting plasma. ... 2) The pressure of the accreting plasma is high enough to permit the plasma to enter the light cylinder . ...

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• Mergingology
• E-P transitions for different orbits
• Nomenclature

... The goal of this project was to develop the technique for industrial preparation of water soluble iron humate as well as of humates of other metals (Zn, Mn, Cu). ... to characterize the properties of the raw humic material used for the product development - potassium humate - produced by Humintech Ltd. under the tradename "Powhumus"; . ... to characterize the main application parameters of the iron humates produced by different techniques - Fe content, solubility, pH stability, Ca2+ stability; . ...

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• Instructions for book-contributors