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Web-service MTPro is designed for defining DNA methyltransferase domain (from RM system)class by specifically made profile search. The class describes a combination of the most common DNA methyltransferase characteristics: methylated atom, motif group, and probable type of RM system. The output format and result definitions see here . Protein sequences of one or more DNA methyltransferases in fasta format is a required information. E-value cutoff . ... Programming: Anna Popenko . ...

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... All contacts alignment . ... Blue background means a contact with backbone phosphate. ... HBond with major groove + contact through a molecule of water with backbone phosphate; . ... contacts through water molecules both with backbone phosphate and major groove; . ... HBond with major groove + contacts through water molecules both with backbone phosphate and major groove; . ... HBond with major groove + engagement in hydrophobic cluster + contact through a molecule of water with backbone phosphate; ...

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